Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03641 ATGACCATGGTTCCTTCTCAAAACAACAAGAACTATGCTTTCTTCTACACTGCTATGAACCAAGTTGAAGGATATAACAGTAATTACAGTAATTGCTTATTAGGATCTGATTTTCTTCTGAGGAATCACATGGCAGAGGATCTGTCAAGAGCCACCACCAACAACCACAACCATGAAGAACAAGAAGAAGAAGAAGAAGCAACTTCAAAGGGAGAAAGAGAACAAGAACAAGAACATGAACATGAAGAAGAAGAACAATCAGGAATCAACAACAATAATAGCAGTAACTGGCTTCAATTGAGCATAGGTTTTCATGATCATGATGCAGCAGCAACAACAAAACAAGACCATCATCATCATCATCATCTTGAAGAAGAAGCAGGTTCAACAATGGCTGCAGCTACAACAGGTTCTGCAGGATCATCATCATCATCACTTGTAGAGCTAGAGTTACTACCAGGTCGCCATTTCAATTGGGCTTCTTCATCTTCTTCTTCAAGAACAGTGATGTTTCCTTTTTCTTCTTCTTCTTCTTCTTTGTTCTATGAACAACAACATCAAACGTCTATGTCTTTGTCCATGTCTATGTCCATGGCATGTGGACCCAACATGAGTGCTCCAACAACAACCTTTGCAACTCATCATCAACAACAAGACATGATGCTAATGAATTGGGCATCATCGTTTTCTTCACATCCTCTCATGCCTCCTTTTCTTTCTTCTTCTTCATCTTTGTCGTCTTTATCACAATCTTGTTCTTCATCTTCTTTGAGGCCTTCTTATTTTCCAACTACTCCTCCCTTTCATCATCAATTTGATGTGGCTGGACCAAGCAGCTCTCAAGATTTCACTTCTTCTACAGTTAGAGTTGTTGATCCTCCAAGAAGACCTCATTCTGGAATTTGGTTCATGCTTCAAGCTGAACAAAACCAAGTTAGAGAACCATTTTTACCTCAAATAGCTAAGAGCTACCTTAGAATCAAAGATGGAAGGATGACAGTTCGGTTGCTAATGAAATATCTAGTTAGCAAACTCAGGCTTCAAATGGAATCAGAGATAGAGATAACATGCAGAGGACAGAAACTTTTACCATTCTTAACGTTGCAGCATGTGAGGGATAACATTTGGACTCAGAGGGACACTACCAACATAACAACAACATCAAGACCTTTGCTTTCAGATTCATCAACCACAGATCATGTCATGGTTCTCCATTACAGTAGAACCAATGCTTAA 1236 0.3924 MTMVPSQNNKNYAFFYTAMNQVEGYNSNYSNCLLGSDFLLRNHMAEDLSRATTNNHNHEEQEEEEEATSKGEREQEQEHEHEEEEQSGINNNNSSNWLQLSIGFHDHDAAATTKQDHHHHHHLEEEAGSTMAAATTGSAGSSSSSLVELELLPGRHFNWASSSSSSRTVMFPFSSSSSSLFYEQQHQTSMSLSMSMSMACGPNMSAPTTTFATHHQQQDMMLMNWASSFSSHPLMPPFLSSSSSLSSLSQSCSSSSLRPSYFPTTPPFHHQFDVAGPSSSQDFTSSTVRVVDPPRRPHSGIWFMLQAEQNQVREPFLPQIAKSYLRIKDGRMTVRLLMKYLVSKLRLQMESEIEITCRGQKLLPFLTLQHVRDNIWTQRDTTNITTTSRPLLSDSSTTDHVMVLHYSRTNA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03641 411 MobiDBLite consensus disorder prediction 111 141 - -
Aip04g03641 411 MobiDBLite consensus disorder prediction 52 96 - -
Aip04g03641 411 Gene3D - 292 385 - -
Aip04g03641 411 PANTHER RING FINGER PROTEIN 8 408 - -
Aip04g03641 411 Coils Coil 48 77 - -
Aip04g03641 411 PANTHER RING FINGER PROTEIN 8 408 IPR044171 GO:0007275
Aip04g03641 411 MobiDBLite consensus disorder prediction 52 87 - -
Aip04g03641 411 MobiDBLite consensus disorder prediction 111 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03641 Aip-Chr4 130849367 130863316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03641 314 407 C3H Transcription Factor Family AT3G23060 37.234 1.44e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03641 - - adu:107486464 371.318