Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03635 ATGGTTTTGGAGGAACGAGTTCTGTTTAACGGCGAACACGACGGAGCCGTCAACGGAGCGCAGCCAGTTTCCGCGGCTCCAGACGGCGGAGATGACGGCAAACCGACGGCGAGGCTGCCGCGGTGGACGCGGCAGGAGATCTTGGTACTAATTCAGGGAAAGACCGACGCCGAAACCAGGTTCCGACCTGGCCGGTCCGCCGTAGGTTCGCCGTCGATCGGTTCGCCGGAGCCTAAGTGGCAGCTGGTATCGTCGTACTGTAAGAAGCACGGCGTGAACCGCGAACCGGTTCAGTGTCGGAAACGGTGGAGCAACCTCGCCGGCGATTACAAGAAGATCAAGGAGTGGGAGTCTAGGGCACGGGATGAAACGGAGTCGTTTTGGGTTATGAGAAACGATATGAGGAGGGAGAGAAAGTTACCGGGGTATTTTGATAAGGAGGTGTATGATATACTTGACGCTGCGGTTTCTCCGGCGTTGGCGGTGATTCCGGCGAGTTCTGCGACGGCGGCGAAGGTGGCGGAGGAAGTGGAAGGTGGTGATGATGCTGAGGTGCACATTTATGACAGTAATAGGAGGGTGAGTGTTGGTGGTGGAGGTGAGGATGGATTATTCTCTGATTCTGAGAGGGACGAGGTTTTTGTTTCTGGGAATAAGAATGTTCCTCATCCTGTTATTCCTATCTCAGCGGAGAAGCAGTATCAACCACCCCTCCAAGGGGAAGGCAATGCTCAAGATGCTACTAATGAGAAACAACCAGCTTCAAATCCGGATTCTACATCTCAAGGAGAACGAAAGAGGAAGCGGTTTTCAGTTGATTCGGAAGAAGAAACTCTGCAGAGTCAACTAATTGATGTGTTAGAAAAAAACGGCAGGATGCTGCGCGATCAACTCGAAGCTCAGAACGTCAATTTCCAATTGGATCGGCAACAGCAGAAAGACACAGCAAGTAACATTGTTGCTGTGCTGGATAAGCTTGCAGATGCTTTAGGAAGAATTGCTGATAAACTATGA 1014 0.5178 MVLEERVLFNGEHDGAVNGAQPVSAAPDGGDDGKPTARLPRWTRQEILVLIQGKTDAETRFRPGRSAVGSPSIGSPEPKWQLVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESRARDETESFWVMRNDMRRERKLPGYFDKEVYDILDAAVSPALAVIPASSATAAKVAEEVEGGDDAEVHIYDSNRRVSVGGGGEDGLFSDSERDEVFVSGNKNVPHPVIPISAEKQYQPPLQGEGNAQDATNEKQPASNPDSTSQGERKRKRFSVDSEEETLQSQLIDVLEKNGRMLRDQLEAQNVNFQLDRQQQKDTASNIVAVLDKLADALGRIADKL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03635 337 MobiDBLite consensus disorder prediction 236 260 - -
Aip04g03635 337 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 12 337 - -
Aip04g03635 337 ProSiteProfiles Myb-like domain profile. 34 107 IPR001005 -
Aip04g03635 337 Gene3D - 42 112 - -
Aip04g03635 337 Coils Coil 295 315 - -
Aip04g03635 337 MobiDBLite consensus disorder prediction 13 39 - -
Aip04g03635 337 MobiDBLite consensus disorder prediction 235 274 - -
Aip04g03635 337 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 12 337 - -
Aip04g03635 337 CDD GT1 40 114 - -
Aip04g03635 337 Pfam Myb/SANT-like DNA-binding domain 41 130 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03635 Aip-Chr4 130796869 130799908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03635 41 115 Trihelix Transcription Factor Family AT1G33240 32.051 5.60e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip04g03635 Myb_DNA-bind_4 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03635 - - adu:107486470 540.036