Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03615 atgatgaagcatgaagacagatatggcaaagactcccatgatataaaagcatggaggtcggctttgcgtgaagtggccgatctaagtggagtgacttgtacagtgaagagCTATGAAGGTGAGATTATCAAGAAAATTGTTCAAGAGGTCTCGGAAAAGCTTCCTCCTGAACCACTATACATTAAGCATCCAATTGGCTTTGATTCTCACTTTGAAGCGGTGGAATCACTTTGGAATATTGAATCTGACAATACCATTTGCCTGCTGGTCATTTATGGAGATGGTAACAAGACCACATTTGTTGGAGAGTTGTTTAACAAGTTCAGGCATCAATTTGAAGCTGCAAGTTTTCTTGACAAAGTATCTGAAAAATCAGCAAGAAGCGGCCTCGAAAATCTCCAAAAGATACTTGTGTATGAGATGGGTGGGCATAAAAGACCTACGCGGGGAAGCACATTAACAGGATCTTCTGATATAAAACAAAGTCTCCGCGGTAAAAGAGTCCTTCTGGTTCTTGATGATGTTGCTACTACAGAACAGTTGCACTCATTGGTAGGAAGAAGTGATTGGTTTCATCCTGGAAGCAGACTTGTTATAACAACAAGAGATGTCAGTTTCCTAAATAATCAAGTGTTAGATGGATTCAAGATTGAGAAATATTGCATTAATGAAGGTGAATTTGAAGGAATGGAAGGTGCTAGATCCAATCAAAAGCAAGATAAGGTCGTTGAGGAAGATATGGTGGGCTTTGTGAATATCTTTAATTGTATAATTGAGCAGTTGAAGGAAAATAAGTCATATCTTAACGTTATCTCCGTGATAGGCATGGGAGGATTGGGTAAGACTACCCTTGTTAAAAATATTTACAACAACAATGAGGTGAAGAAGTTGTTCTCTTATTGTGTGTGGGTTACTGTTTCTAAGGACTACAAAGCCAAGGAGCTTCTTCAAAGCCTTCTACAAGGTTTTGGGTTTTCCATGTCTACTAATGGTGAGGACTATGAAAAGAGCAAGCTCCAAAAGTTCTTAGAGGAGAAGAAGTATTTGATAGTACTTGACGACATATGGGAGCCTGAAGTTTGGGATGAAATAGAATGCTTATTTCCGGATAACAAAAATGGTAGTGCAATAGTGATAACTAGCCGGAATGATGGCGTGGCAAACTATACAAGATCAAAGTCCTACTACCCTCCATTGCTAGATAAAGATGAAAGTTGGAAATTATTCTGCAAAAAGGTGTTTAAGGAAAGGGAGTGTCCCTCTGTTTTAGAACATATGGGTAGATTAATGGTTGAAAAATGTCGAGGTTTACCGCTTGCTATTGTAACCTTAGCAGGAGTTGTTGCTAAGAAGAGGAGAGAAACAGTTGAGTGGATAAGAATCGTGCGCAACGTTCTTTGGTATGTTGACAAAGATGATGGCAGAGTAATAAATGTGTTAAAGCTCAGTTATGACAGTTTACCTCAAAGACTGAAGTCTTGTTTTCTTTTTTTGGGGGTGTATCCCGAAGATTATAAAATTAATGTGAAACGATTGAAACTATTATGGATTGCTGAAGGATTAATACAACTGCCAGAAATAGGAATATCAGATGGTCCAGAAGTAGAAGATATTGCTGAAGAGTACTTGAATGAGTTGGTGGATCGTAGCTTGGTGATGGTGGTAGAAAGAAGGAGTGATGGCGGGGTCAAAAGCTGCTGGATTCATGACCTTCTCCTTGATCTTTGCATATCAGAGAGTAGAGCTGATAAACAAATAGAGATCTGCACGGAGAAGAACATTAGTTCCTTGGGCAATGCTAAATCTTGTAGATTGTCCCTTCGAAAAAATTATATGGTTTCACTTAAGCAGTCCGATCACTTCAGAATCCATTCTTTAATCTGCATCTGGGACGACATCAACTTTGGATGGATACGTCTATCAAGTTTCCCTTTAGCTCGCATTGTGGACCTTGGATATGGTACTCTTCATTCATCAATGGCCCGGGATTTGGAGATGTTTATCTATTTAAGATACTTGAGACTAAGGAAGTGTTTCCACCAATCAGACGAGGTTGTTCCAATCTGCGCCCTTCCAAATCTAGAAACTCTAATTATTGAAAATATTGCTCTCTATGGTCATAAAGATGACTATAGTAATACTTATACTCTCCCACATGAAATATGGAGGCTCAAGAAACTGAGACATCTTGAAGGGAGGCTATGCATGACGAGTAAGACGATTCCAACGGACACCCCCGGAGAAGACTGTTTGCCGAATCTCCAAACCCTCCAAGTTGTCACTCTTGAAGAAGGATTGACAGTATCCTCCATTGTTAATGGAAGATTCCCCAAGCTTAGAAAATTGGGTTTGCGGTGGAATATCAAAAGTAAATATACAGAGCATCAATTATTACAAGGCTTGCATCACCTGGAAAATCTAGAAAAACTAAAACTGGTGGACTTTGAGGAATTACCATTAAAAGCCCGGGAATTTCCTTCCAGTATTGCCAAGATAAACATAATGTTATCAGATGAGGAGCTTCAATGGTTTGGGGAATTCAACTACAGTTGCTTGATTACTCTGGGAGACCTCATCAGCCTCCGTGTTCTGAAAGTAACCATGCAAGGGTTGGGCAGTGGCGACTCTCTTCGCCTTGCTGCTGGAAGCTTCCGAAATCTTGAAGTGCTTCATTTGGCAGAGAAGAATTTCAAAGAATGGATATTAGAGAAAGGTGCAATGCCATCTCTCCAGCATCTGATCATCGAATTCTGCAACTTGAATGAGCTTCCAGAGCAACTGTGGTCCTTGACTAACTTGCAAGTTGTGCATGTTGTTGCCCCAAAGCCAGCATTGAGAAATAGCCTCGAACATGTTAAGCCCAAGAATGGTTGTAAGCTCATCATAGAAACACTCGACCAGTATCTTGGAAGCATAACTAAGCGGAGCTATCAAGTCCCACCATCAAGCCCAGAATCTCCCACATCCAACTGA 2973 0.3872 MMKHEDRYGKDSHDIKAWRSALREVADLSGVTCTVKSYEGEIIKKIVQEVSEKLPPEPLYIKHPIGFDSHFEAVESLWNIESDNTICLLVIYGDGNKTTFVGELFNKFRHQFEAASFLDKVSEKSARSGLENLQKILVYEMGGHKRPTRGSTLTGSSDIKQSLRGKRVLLVLDDVATTEQLHSLVGRSDWFHPGSRLVITTRDVSFLNNQVLDGFKIEKYCINEGEFEGMEGARSNQKQDKVVEEDMVGFVNIFNCIIEQLKENKSYLNVISVIGMGGLGKTTLVKNIYNNNEVKKLFSYCVWVTVSKDYKAKELLQSLLQGFGFSMSTNGEDYEKSKLQKFLEEKKYLIVLDDIWEPEVWDEIECLFPDNKNGSAIVITSRNDGVANYTRSKSYYPPLLDKDESWKLFCKKVFKERECPSVLEHMGRLMVEKCRGLPLAIVTLAGVVAKKRRETVEWIRIVRNVLWYVDKDDGRVINVLKLSYDSLPQRLKSCFLFLGVYPEDYKINVKRLKLLWIAEGLIQLPEIGISDGPEVEDIAEEYLNELVDRSLVMVVERRSDGGVKSCWIHDLLLDLCISESRADKQIEICTEKNISSLGNAKSCRLSLRKNYMVSLKQSDHFRIHSLICIWDDINFGWIRLSSFPLARIVDLGYGTLHSSMARDLEMFIYLRYLRLRKCFHQSDEVVPICALPNLETLIIENIALYGHKDDYSNTYTLPHEIWRLKKLRHLEGRLCMTSKTIPTDTPGEDCLPNLQTLQVVTLEEGLTVSSIVNGRFPKLRKLGLRWNIKSKYTEHQLLQGLHHLENLEKLKLVDFEELPLKAREFPSSIAKINIMLSDEELQWFGEFNYSCLITLGDLISLRVLKVTMQGLGSGDSLRLAAGSFRNLEVLHLAEKNFKEWILEKGAMPSLQHLIIEFCNLNELPEQLWSLTNLQVVHVVAPKPALRNSLEHVKPKNGCKLIIETLDQYLGSITKRSYQVPPSSPESPTSN 990
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03615 990 PANTHER DISEASE RESISTANCE PROTEIN RP 238 963 IPR044974 GO:0006952
Aip04g03615 990 Gene3D Ribonuclease Inhibitor 576 840 IPR032675 -
Aip04g03615 990 Gene3D Ribonuclease Inhibitor 841 967 IPR032675 -
Aip04g03615 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 242 498 IPR027417 -
Aip04g03615 990 Gene3D - 489 575 IPR036388 -
Aip04g03615 990 SUPERFAMILY L domain-like 568 937 - -
Aip04g03615 990 PANTHER - 238 963 - -
Aip04g03615 990 Gene3D - 399 488 IPR042197 -
Aip04g03615 990 Gene3D - 1 51 IPR035897 -
Aip04g03615 990 Gene3D - 52 212 IPR027417 -
Aip04g03615 990 Gene3D - 235 395 IPR027417 -
Aip04g03615 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 214 IPR027417 -
Aip04g03615 990 Pfam NB-ARC domain 256 485 IPR002182 GO:0043531
Aip04g03615 990 Pfam NB-ARC domain 84 211 IPR002182 GO:0043531
Aip04g03615 990 PRINTS Disease resistance protein signature 802 818 - -
Aip04g03615 990 PRINTS Disease resistance protein signature 270 285 - -
Aip04g03615 990 PRINTS Disease resistance protein signature 342 356 - -
Aip04g03615 990 PRINTS Disease resistance protein signature 434 448 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip04g03615 Aip-Chr4 130613398 130616888 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03615 16 203 WRKY Transcription Factor Family AT4G12020 29.474 3.75e-12 68.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03615 - - adu:107486187 1306.2