Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03608 atgtccattgctgtgctgtgtcaaaactacgcctcttcagcatggtgcttggatgaacttatccaaatcatggagtgctctaacaaaggaacaaaacggccagttttgccaattttttaccatgtggatccatcagatataaggcatcagaagaatcaatatgaccaagacatgaagaagcatgaaagcagatatggcaaagactcgcacaaggtacaagcatggaggttggctttgtatgaagttagcaatctaagcggagagcattgtaaagcgaatcgCTATGAAAGTGAGATTATCGAGAGTATTGTTGAAGAGGTCTTGGCAAAGCTTCCTCCTGAACCACTATATATTAAGCATCCAATTGGTTTTGATTCTCACTTTGAAGCGGTGGAATCACTTTGGAATATCAAGTCTCATAATACCATTTGCATGTTGGTCATTTATGGAGATGGTAACAAGACCACATTTGCTGGAGAGTTGTTTAACAAGTTCCAGCATCAATTTCAAGCTGCGAGTTTTCTTGATAAAGTCTCTGAAAAATCAAGGGGAGGTGCTGATGGCCTAGAAAATCTCCAAAAAACACTTTTATATGAGATGGGTGTGCATGAAAAAGTTAAGTTGGGAAGCACATTAAAAGGATCTTTTGATATAAAGCAAAGTTTGCGTAATAAAAGAGTCTTTCTAGTTCTTGATGATGTTGATAGTACAGAACAGCTGGATGCATTGGCAGGAGGAGGTGATTGGTTTTGTCCTGGGAGTAGAATTGTTATAACAACAAGAGATGCCAATTTCCTAAGTAATCAAGTGTTACACGGATTCAAGATTGAGAGATATTGCATTAATGAAGGTGAATTTGATAGAATGGAAGCTCTCGGGTCAAATCAAAAGCAAGATAAGGTAGTCGAGGAAGATATGGTGGGCTTTGTGAATATCTTCAATGATGTAACTAAGCAGTTGAAGGAAAATGACTCAGGTGTTGATGTTATCTCCATAATAGGCATGGGTGGTTTGGGTAAGACTACTCTCGCTAAAAAGATTTACAACAATAATGAGGTGAAGAAGTTGTTCCCTTGTTGTGTGTGGGTTACTGTTTCTAAGGACTACAAAGCCAAGGAGCTTCTTCAAAGCCTTCTGAAAGGTTGTGGGTTATCCGAGTCCATTAAAGGCGAAGACATAAGCGCGGATTATCAAAGGAGCGTGGTCCGAGAATTCTTAGAGACAAAGAAGTATTTGATAGTGCTTGACAACATATGGGAGCCTGAAGTTTGGGATGAGGTAGAATGCTTTTTTCCAGATAACAATAATGGGAGTGCAATATTGATAACTAGCCGTAATGATGGTGTGGCAAACTATACAGGATCAAAATCTTACTACCCTCCATTGCTAGATAAAGATGAAAGCTGGAAATTATTCTGCATGAAGGTGTTTAAGAGCAGAGAGTGTCCTTCTAATTTAGAACACATGGGTAGATTAATGGTCGAAAAATGTGGAGGTTTACCACTTGCTATTGTAACCTTAGCAGGAGTTGTTGCTAAGAAGAGAAGACTACCAGTTGAGTGGACGAGAATCATGCGCAACGTCCTGTGGTACGTTGACAAGGATGATGGCAGAGTAACAAATGTGTTAAAGCTCAGTTATGATAGCTTGCCTCAAAGATTGAAGTCTTGTTTTTTATTTTTGGGAGTGTATCCCGAAGATTATGAAATTCCTGTGAAACGATTGAAACAATTATGGATTGCTGAAGGGTTAATACAACCGCCGAAAATAGGAATATCAGATGGTCTAGAAGTAGAAGATATTGCTGAAGAGTACTTGAATGAGCTGGTGGATCGTAGTTTGGTGATGGTGGTGAAAAGAAAGAGTGACGGAGGGGTCAAAAGTTGCTGGATTCATGACCTTCTCCTTGATCTTTGCATATCAGAGAATAGAGCTGAAAAAGGTATAGAGATCTGCACTGGAAAAGACATTCCATCCCTTGACAATGTCGAGACCTGTAGGCTGTCCCTTCGAGGCCAGTATTCGAATTTACTTGAGCAGTGTGATCTCTCCCGCGTTCATTCTTTAATGTGCTTTTGGGATTATTGCTATTTTACAGAAACGCTGTGGATCAATGTAATGAGTTTCAGTTCAGCTCGCATTCTGGACTTTGGAAAACCCTGTTTTGGTTTATCACCAGCGGCCCAGAACTTGGGTACACACATCCATTTAAGATACTTGAGAGTAAATCAGGGTGCATGCGTCGAGGATCATCCTGATCTCATTTGCAGCCTTGCGAATCTAGAAACTCTAATTGTTGAAGACTTTTCTGATAGGCATTTTTTTAAGCTCCCGCATGGAATATGGAGGCTCAAGAAACTGAGACATCTTGAAGGAAGGCTACGTATGACGAGCAAGACGGTTCCACCAAACACGTCGGGAGAAGACTGTTTGCCGAATCTCCAAACTCTCCAACTTGTCACTCTTGAAAAAGGGCTGACAATGTCCTCGATTGCTATTGGAAGATTCCCCAAGCTGAGAAAATTTGGTTTGCGGTGGAATTTTGGAAGTGGATGCACAGAGCATGAACTATTACAAGGCTTGCATCACCTAAAAAATCTAGAAGAACTAAAACTAGTGGACTTTCATGAATTGCCACAAGCACATGAATTTCCCTCCAATATTACCAAGATAACGATAAACATATTAAGTCCTACAGATTGGTTCGGCTTCAACTACCGCTACAGTAGCTTGAATACTCTAGGAGATCTTACCCGCCTCCATGTTCTGAAGGTAACCACACCAGTGCATTACCTGGAGGACTCTCTTCGCTTTGCCGCTGGAAGCTTCCCAAATCTTGAAGTGCTTCATGTGACAATGATGCGTGTCAGAGAATGGATATTAGAGGAAGGTGCAATGCCATCTCTCCAACACCTAATCATGGACCAGTGTTACTTGGATGAGCTTCCAGAGCAACTGTGGTCCTTGAATAACTTGCAAAATGTGCGTGTTGTGGACCCACCTCGAAAATTGGGAGAAAGCCTCCTACGTGTTAAGCCAAAGGATGGTTGTAAGGTCATCTTAGAAGGACAGGACACGGGATATTATGATGATTATGTTGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATAGATAG 3141 0.3725 MSIAVLCQNYASSAWCLDELIQIMECSNKGTKRPVLPIFYHVDPSDIRHQKNQYDQDMKKHESRYGKDSHKVQAWRLALYEVSNLSGEHCKANRYESEIIESIVEEVLAKLPPEPLYIKHPIGFDSHFEAVESLWNIKSHNTICMLVIYGDGNKTTFAGELFNKFQHQFQAASFLDKVSEKSRGGADGLENLQKTLLYEMGVHEKVKLGSTLKGSFDIKQSLRNKRVFLVLDDVDSTEQLDALAGGGDWFCPGSRIVITTRDANFLSNQVLHGFKIERYCINEGEFDRMEALGSNQKQDKVVEEDMVGFVNIFNDVTKQLKENDSGVDVISIIGMGGLGKTTLAKKIYNNNEVKKLFPCCVWVTVSKDYKAKELLQSLLKGCGLSESIKGEDISADYQRSVVREFLETKKYLIVLDNIWEPEVWDEVECFFPDNNNGSAILITSRNDGVANYTGSKSYYPPLLDKDESWKLFCMKVFKSRECPSNLEHMGRLMVEKCGGLPLAIVTLAGVVAKKRRLPVEWTRIMRNVLWYVDKDDGRVTNVLKLSYDSLPQRLKSCFLFLGVYPEDYEIPVKRLKQLWIAEGLIQPPKIGISDGLEVEDIAEEYLNELVDRSLVMVVKRKSDGGVKSCWIHDLLLDLCISENRAEKGIEICTGKDIPSLDNVETCRLSLRGQYSNLLEQCDLSRVHSLMCFWDYCYFTETLWINVMSFSSARILDFGKPCFGLSPAAQNLGTHIHLRYLRVNQGACVEDHPDLICSLANLETLIVEDFSDRHFFKLPHGIWRLKKLRHLEGRLRMTSKTVPPNTSGEDCLPNLQTLQLVTLEKGLTMSSIAIGRFPKLRKFGLRWNFGSGCTEHELLQGLHHLKNLEELKLVDFHELPQAHEFPSNITKITINILSPTDWFGFNYRYSSLNTLGDLTRLHVLKVTTPVHYLEDSLRFAAGSFPNLEVLHVTMMRVREWILEEGAMPSLQHLIMDQCYLDELPEQLWSLNNLQNVRVVDPPRKLGESLLRVKPKDGCKVILEGQDTGYYDDYVVEEEEEEEEEENR 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03608 1046 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 87 IPR035897 -
Aip04g03608 1046 Gene3D - 109 271 IPR027417 -
Aip04g03608 1046 Gene3D - 1 108 IPR035897 -
Aip04g03608 1046 PRINTS Disease resistance protein signature 497 511 - -
Aip04g03608 1046 PRINTS Disease resistance protein signature 329 344 - -
Aip04g03608 1046 PRINTS Disease resistance protein signature 862 878 - -
Aip04g03608 1046 PRINTS Disease resistance protein signature 405 419 - -
Aip04g03608 1046 ProSiteProfiles TIR domain profile. 1 111 IPR000157 GO:0007165
Aip04g03608 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 301 561 IPR027417 -
Aip04g03608 1046 Gene3D - 462 551 IPR042197 -
Aip04g03608 1046 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 292 978 - -
Aip04g03608 1046 SUPERFAMILY L domain-like 632 996 - -
Aip04g03608 1046 Gene3D Ribonuclease Inhibitor 644 1009 IPR032675 -
Aip04g03608 1046 Pfam NB-ARC domain 145 268 IPR002182 GO:0043531
Aip04g03608 1046 Pfam NB-ARC domain 314 548 IPR002182 GO:0043531
Aip04g03608 1046 Gene3D - 294 458 IPR027417 -
Aip04g03608 1046 Gene3D - 552 641 IPR036388 -
Aip04g03608 1046 Pfam TIR domain 2 112 IPR000157 GO:0007165
Aip04g03608 1046 PANTHER DISEASE RESISTANCE PROTEIN RP 292 978 IPR044974 GO:0006952
Aip04g03608 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 282 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03608 Aip-Chr4 130555299 130559622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03608 12 277 WRKY Transcription Factor Family AT4G12020 28.889 4.88e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03608 - - adu:107486187 1618.59