Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03607 atgaagcagcatgaaagcagatatggcaaagactcgcacagggtacaagcatggaggttggctttGTATGAAGTTAGCAATCTAAGCGGAAAGCACTGTAAAGTGAATCGCTATGAAAGTGAGATTATCAAGAGTATTGTTGAAGAGGTCTCGGCAAAGCTTCCTCCTGAACCACTATATATTAAGCATCCAATTGGTTTTGATTCTCACTTTGAAGCGGTGGAATCACTTTGGAATATCAAATCTCATAATACCATTTGCATGTTGGTCATTTATGGAGATGGTAACAAGACCACATTTGTTGGAGAGTTGTTTAACAAGTTCCAGCATCAATTTGAAGCTGCGAGTTTTCTTGATAAAGTCTCTGAAAAATCAAGAGGTGTTGATGGCCTAGAAAACCTCCAAGTAGCACTTTTGTATGAGATGGGTGTGCATAAAAAACCTATGCTAGGAAGTACATTAAAAGGATCTTCTGATATAAAACAAAGTCTCCGCAATAAAAGAGTCCTTCTGGTTCTTGACGATGTTGATAATACCGAACAATTGGATTCATTGGCAGGAGGAGGTGATTGGTTTTGTCCTGGTAGTAGAATTGTTATAACAACAAGAGATGCCAATTTTCTAAATAATCAAGTGTTAGATGGATTCAAGATTGAGAAATATTGCATTAATGAAGGTGAATTTGATAGAATGGAAGCTCTCGGGTCAAATCATCAAAAGCAAGATGAGGTAGTCGAGGAAGATATGGTGGGATTTGTGAATATCTTCAACGATGTAACTAAGCAGTTGAAGGAAAATGACTCATGTGTTGATGTTATCTCCATAATAGGCATGGGTGGTTTGGGTAAGACTACTCTCGCTAAAAAGATTTACAACAATAATGAGGTGAAGAAGTTGTTCCCTTGTTGTGTGTGGGTTACCGTTTCTAAGGACTACAAAGCCAAGGAGCTTCTTCAAAGCCTTCTAAAAGGTTGTGGGTTATCCGAGTCCATTAAAGGCGAAGACATAAGCGAGGATGATCAAAAGAGCAAGGTCCAAAAGTTCTTAGAGAACAAGAAGTATTTAATAGTGCTTGATGACCTATGGGAACCTGAAGTTTGGGATGAGGTAGATTGCTTATTTCCGGAGAACAATAATGGCAGTGCAATATTGATAACTAGCCGTAATGATGGTGTGGCAAACTATACAGGATCAAAATCTTACTACCCTCCATTGCTAGATAAAGATGAAAGCTGGAAATTATTCTGCAAGAAGGTGTTTAAGAGAAGAGAGTGTCCTTCTGTTTTAGAACATATGGGTAGATTAATGGTCGAAAAATGTCGAGGTTTACCACTTGCTATTATAACCTTAGCGGGAGTTGTTGCTAAGAAGAGGAGACTTCCAGTTGAGTGGACGAGAATCATGCGCAACGTCCTTTGGTATGTTGACAAGGATGATGGCAGAGTAACAAATGTGTTAAAGCTCAGTTATGACAGCTTGCCTAAAAGATTGAAGTCTTGTTTTTTATTTTTGGGAGTGTATCCCGAAGATTATGAAATTCCTGTGAAACGATTGAAACAATTATGGATTGCTGAAGGGTTAATACAACCGCCAAAAATAGGAATATCAGATGGTCTAGAAGTAGAAGATATTGCTGAAGAGTACTTGAATGAGCTGGTGGATCGTAGTTTGGTGATGGTGGTGAAAAGAAAGAGTGACGGAGGGGTCAAAAGTTGCTGGATTCATGACCTTCTCCTTGATCTTTGCATATCAGAGAATAGAGCTGAAAAAGGTATAGAGATCTGCACTGGAAAAGACATTCCATCCCTTGACAATGTCAAATCTTGTAGGTTTTCCCTTCGAAATACCAACCGGGATTCATTTAAGCAGTGTGATCACTCCTGCATCCGTTCTTTAATGTGCTTCTCCGGTCGCTACTTTCCAGAGGGACTTGATCTAATGAGTTTCAATTCAGCTCGCATTTTGGAATTTAGATATGGTTATGCTTTATCATTAACTACCCAGGATTTGAGTATGATCATCCATTTAAGATACTTGAGACTCTATCGAGTTGTGCACTCTCCAACAAAGAATCACCTTGATCCAATCTGCACCCTTCCGAATCTAGAAACTCTAATTCTTGACACAAATGATGTTGTTTATAACATTCCGCATGGAATATGGAGGCTCAAGAAATTGAGACATCTTGAAGGAATATTACGCATGAGGAGTAAGATCGTTCCACCTGAGACGTCAGGAGAAGACTGTTTGCCAAATCTCCAAACTCTCCAATATTTGATTGTTGAAGAACGAACGAAAATATCCTCCATTGTTAATGGAAGATTCCCCAAGCTGAGAAAATTGGGTTTAAAATGTTGGAAGCATGAGCTAAAAGGCTTGCATCACCTGAAAAATCTAGAAAAACTAAAACTTGAGGGCTTTACGCAATTGCCATCAAAAGCACATGAATTTCCTTCTAATATTGCCAAGATAAACATAGGGTTAAGGTCAGCCAATTTTACACTTGCTGTCATCAACTACAGTTGCTTGAATACTCTAGGACACCTTACCAGCCTCCGTGTTCTGAAAGCATGCTCGGGGAAGGTCAAGGGCAAATCTCTTTGCCTTGCCGCTGGAAGCTTCCCAAATCTTGAAGTGCTTCATTTGACAGACATAAGTTTCAAAAGTTGGATATTAGAGAAAGGTGCAATGCCATCTCTCCAACATCTGTTCATCAAAGACTGTGATGACTTGGATAAGCTTCCAGAGCAACTGTGGTCCTTGACTAACTTGCAAGATGTGCGTGTGGTGAACCCAAATCCAAAATTGAGAGAAAGCCTCAGGGAACGTGCTAAGCCCAAGGATGGTTGTAAGCTCATCGTAAGCGAAGTCCCAGATAAGTGGATTATATGA 2892 0.3866 MKQHESRYGKDSHRVQAWRLALYEVSNLSGKHCKVNRYESEIIKSIVEEVSAKLPPEPLYIKHPIGFDSHFEAVESLWNIKSHNTICMLVIYGDGNKTTFVGELFNKFQHQFEAASFLDKVSEKSRGVDGLENLQVALLYEMGVHKKPMLGSTLKGSSDIKQSLRNKRVLLVLDDVDNTEQLDSLAGGGDWFCPGSRIVITTRDANFLNNQVLDGFKIEKYCINEGEFDRMEALGSNHQKQDEVVEEDMVGFVNIFNDVTKQLKENDSCVDVISIIGMGGLGKTTLAKKIYNNNEVKKLFPCCVWVTVSKDYKAKELLQSLLKGCGLSESIKGEDISEDDQKSKVQKFLENKKYLIVLDDLWEPEVWDEVDCLFPENNNGSAILITSRNDGVANYTGSKSYYPPLLDKDESWKLFCKKVFKRRECPSVLEHMGRLMVEKCRGLPLAIITLAGVVAKKRRLPVEWTRIMRNVLWYVDKDDGRVTNVLKLSYDSLPKRLKSCFLFLGVYPEDYEIPVKRLKQLWIAEGLIQPPKIGISDGLEVEDIAEEYLNELVDRSLVMVVKRKSDGGVKSCWIHDLLLDLCISENRAEKGIEICTGKDIPSLDNVKSCRFSLRNTNRDSFKQCDHSCIRSLMCFSGRYFPEGLDLMSFNSARILEFRYGYALSLTTQDLSMIIHLRYLRLYRVVHSPTKNHLDPICTLPNLETLILDTNDVVYNIPHGIWRLKKLRHLEGILRMRSKIVPPETSGEDCLPNLQTLQYLIVEERTKISSIVNGRFPKLRKLGLKCWKHELKGLHHLKNLEKLKLEGFTQLPSKAHEFPSNIAKINIGLRSANFTLAVINYSCLNTLGHLTSLRVLKACSGKVKGKSLCLAAGSFPNLEVLHLTDISFKSWILEKGAMPSLQHLFIKDCDDLDKLPEQLWSLTNLQDVRVVNPNPKLRESLRERAKPKDGCKLIVSEVPDKWII 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03607 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 234 IPR027417 -
Aip04g03607 963 SUPERFAMILY L domain-like 574 929 - -
Aip04g03607 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 504 IPR027417 -
Aip04g03607 963 Gene3D - 495 584 IPR036388 -
Aip04g03607 963 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 243 929 - -
Aip04g03607 963 Gene3D Ribonuclease Inhibitor 645 807 IPR032675 -
Aip04g03607 963 Gene3D - 1 50 IPR035897 -
Aip04g03607 963 Gene3D - 405 494 IPR042197 -
Aip04g03607 963 Gene3D Ribonuclease Inhibitor 816 945 IPR032675 -
Aip04g03607 963 Pfam NB-ARC domain 88 222 IPR002182 GO:0043531
Aip04g03607 963 Pfam NB-ARC domain 257 491 IPR002182 GO:0043531
Aip04g03607 963 Gene3D - 237 401 IPR027417 -
Aip04g03607 963 PRINTS Disease resistance protein signature 794 810 - -
Aip04g03607 963 PRINTS Disease resistance protein signature 272 287 - -
Aip04g03607 963 PRINTS Disease resistance protein signature 348 362 - -
Aip04g03607 963 PRINTS Disease resistance protein signature 440 454 - -
Aip04g03607 963 Gene3D - 51 213 IPR027417 -
Aip04g03607 963 PANTHER DISEASE RESISTANCE PROTEIN RP 243 929 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03607 Aip-Chr4 130536150 130540049 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03607 2 204 WRKY Transcription Factor Family AT4G12020 30.583 4.13e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03607 - - adu:107486187 1436.4