Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03602 atgatgaagcatgaagacagatatggcaaagactcccatgatataaaagcatggaggtcggctttgcgtgaagtggccaatctaagtggagtgacttgtacagtgaagagCTATGAAAGTGAGATTATCAACAAAATTGTTCAAGAGGTCTCGGAGAAGCTTCCTCCTGAACCACTATACATTAAGCATCCAATTGGTTTTGATTCTCACTTTGAAGCAGTGGAATCACTTTGGAATATTGAATCTGACAATACCATTTGCATGCTGGTCATGTATGGAGATGGTAACAAGACCACATTTGTTGGAGAGTTGTTTAACAAGTTCAGGCATCAATTTGAAGCTGCGAGTTTTCTTCATAAAGTCTCTGAAAAATCAAGGAGGAGTGCTGATGACCTAGAAAATCTCCAAGAAACACTTTTGCATGAAATGGGTGTGCATAAAAAACCTAAGCTGGGAAGCATGTTAAAAGGATCTTCTATTATAAAACAAAGTTTGCATAATAAAAGAGTCTTTCTAGTTCTTGATGATGTTGATAGTATAGAACAGTTGGATTCATTGGCAGGAGGAGGTGATTGGTTTTGTCCTGGTAGTAGAATTGTTATAACAACAAGAGATGCCAAATTCCTAAATAATCAAGTGTTAGATGGATTCAAGATTGAGAAATATTGCATTAATGAAGGTGAATTCGAAGGAATGCAAGGTGCTAGATCAAATCAGAAGAAAGATAAGGTCTTCGAGGAAGATATGGTGGGCTTTGTGGATATCTTCAACAATGTAACCAAGCAGTTGAAGGAAAATGAGACCAATCTTAATGTTATCTCGGTAATAGGCATGGGTGGTTTGGGTAAGACTACCCTTATTAAAAAAATTTACAACAATAATGAGGTGAAGAAGTTGTTCTCTTATTGTGTGTGGATTACCGTTTCTAAGGACTACAAAGCCACTGAGCTTCTTCAAATCCTTCTGAAAGGTTGCGGGTTGTTTGAGTCTACTAAAGGCAAAGACATAAGCAAGGATGATCAAAAGAGCAAGGTCCAAAAGTTCTTAGAGAAGAAGAAGTATTTGATAGTGCTTGACGACATATGGGAGCCTGAAGTTTGGGCTGAGGTAGAATGCTTATTTCCGGATAACAATAATGGCAGTGCAATATTGATAACACATAAAAAAATCAAATAA 1176 0.3333 MMKHEDRYGKDSHDIKAWRSALREVANLSGVTCTVKSYESEIINKIVQEVSEKLPPEPLYIKHPIGFDSHFEAVESLWNIESDNTICMLVMYGDGNKTTFVGELFNKFRHQFEAASFLHKVSEKSRRSADDLENLQETLLHEMGVHKKPKLGSMLKGSSIIKQSLHNKRVFLVLDDVDSIEQLDSLAGGGDWFCPGSRIVITTRDAKFLNNQVLDGFKIEKYCINEGEFEGMQGARSNQKKDKVFEEDMVGFVDIFNNVTKQLKENETNLNVISVIGMGGLGKTTLIKKIYNNNEVKKLFSYCVWITVSKDYKATELLQILLKGCGLFESTKGKDISKDDQKSKVQKFLEKKKYLIVLDDIWEPEVWAEVECLFPDNNNGSAILITHKKIK 391
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03602 391 PRINTS Disease resistance protein signature 272 287 - -
Aip04g03602 391 PRINTS Disease resistance protein signature 348 362 - -
Aip04g03602 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 386 IPR027417 -
Aip04g03602 391 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 219 IPR044974 GO:0006952
Aip04g03602 391 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 219 - -
Aip04g03602 391 Gene3D - 1 50 IPR035897 -
Aip04g03602 391 Pfam NB-ARC domain 257 387 IPR002182 GO:0043531
Aip04g03602 391 Pfam NB-ARC domain 87 213 IPR002182 GO:0043531
Aip04g03602 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 216 IPR027417 -
Aip04g03602 391 Gene3D - 238 390 IPR027417 -
Aip04g03602 391 Gene3D - 51 215 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip04g03602 Aip-Chr4 130497947 130499295 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03602 16 207 WRKY Transcription Factor Family AT4G12020 31.282 1.94e-15 76.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03602 - - aip:107635555 791.571