Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03588 ATGTGTTCTTGCAGCTATGAAAGTGATGTTATCATGAATATTGTTGAAGAAGTCTCAGCAAAAGTTCCTCCTGAACCACTTTACATTAAGCATCCAATTGATTTTGGTTCTCAATTTGAAGTGGTGGAATCACTTTTGGACACTAAATCTCATGATACTCTCTGCATGCTGATTCTTTATGGAGATGTTGAAACAAAAAAAAGCACATTTGCAGGGGAGCTGTACAACAAGATAAAGCATCAATTTCAAGCTGCAAGTTTTCTTGATAAAGTACGTATAAAATCAAGGGGGATCCCCAATAGCCTAGAAAATCTCCAAGAGACACTTTTATCAGGTATGTGTGTGCATAAGAAACCAAGAATAGGCAGCACATTAAAAGGATCTTCTGACATAAAACAAAGTCTGCACAATAAAAGAGTTCTTCTGGTTCTAGATGACGTTGATAGTATAGAACAATTGGACTCACTTGCAGGAGGAAGTGATTGGTTTGGTCTTGGTAGTAGAATCATTATAACAACAAGAGATGTGAATGTGCTAGATAAGTATGAGTTGAATGGTGTTAAGGTTATGAAATATTGCATTGATGAAGGTGAATTTAAAAGCATGGAAGGTGCAAAATCAAATCACGAACAAGATAAGGACCTCCAGGAAGATATAGTGGGCTTTGTAGAGATCTTCAATGAAATAGTTGAGAAATTGAAGGAAAATGAGTCATGCACTGAAGTTGTCTCCATAATCGGCATGGGTGGGTTGGGTAAGACTACCCTTGCTCGAAAAATTTATAACAATAATAAGGTGAAAAAGTTATTCTCTTGTTGTGGATGGGTTACTATTTCTAAAGACTACAAAGCTAAGGACGTTCTCACAAGCCTTGTCAATGGTTGGGGATTGTCCAAGTCTACTACTGAATACAAAGTCTTAAGTGAGAAGGAACAAAAGAGCAAGGTCCAAGAACACTTGGACAGGAACAAGTATCTGATAGTGCTTGATGACTTATGGGAACCTGAAGTCTGGGATGAGGTAGAAAGTTTATTTCCAAATAACAAAAGTGGCAATACAATACTGATAACTAGTCGTAATGACGAGGTGGCAAATTATACAAGGTCAAAGTCCTACTACCCTCCATTCCTAGACAAAAATGAAAGCTGGAAACTTTTCTGCAAGGTGTTTGGGACACAACAGTGTCCTCCTGTTCTCGAAATGTCCATTGTTGTGCTGTGCCAGaattatgcttcctcctcatgCTATGAAAGTGATGTTATCATGAATATTGTTGAAGAAGTCTCAGCAAAAGTTCCTCCTGAACCACTTTACATTAAGCATCCAATTGATTTTGGTTCTCAATTTGAAGTGGTGGAATCACTTTTGGACACTAAATCTCATGATACTCTCTGCATGCTGATTCTTTATGGAGATGTTGAAACAAAAAAAAGCACATTTGCAGGGGAGCTGTACAACAAGATAAAGCATCAATTTCAAGCTGCAAGTTTTCTTGATAAAGTACGTATAAAATCAAGGGGGATCCCCAATAGCCTAGAAAATCTCCAAGAGACACTTTTATCAGGTATGTGTGTGCATAAGAAACCAAGAATAGGCAGCACATTAAAAGGATCTTCTGACATAAAACAAAGTCTGCACAATAAAAGAGTTCTTCTGGTTCTAGATGACGTTGATAGTATAGAACAATTGGACTCACTTGCAGGAGGAAGTGATTGGTTTGGTCTTGGTAGTAGAATCATTATAACAACAAGAGATGTGAATGTGCTAGATAAGTATGAGTTGAATGGTGTTAAGGTTATGAAATATTGCATTGATGAAGGTGAATTTAAAAGCATGGAAGGTGCAAAATCAAATCACGAACAAGATAAGGACCTCCAGGAAGATATAGTGGGCTTTGTAGAGATCTTCAATGAAATAGTTGAGAAATTGAAGGAAAATGAGTCATGCACTGAAGTTGTCTCCATAATCGGCATGGGTGGGTTGGGTAAGACTACCCTTGCTCGAAAAATTTATAACAATAATAAGGTGAAAAAGTTATTCTCTTGTTGTGGATGGGTTACTATTTCTAAAGACTACAAAGCTAAGGACGTTCTCACAAGCCTTGTCAATGGTTGGGGATTGTCCAAGTCTACTACTGAATACAAAGTCTTAAGTGAGAAGGAACAAAAGAGCAAGGTCCAAGAACACTTGGACAGGAACAAGTATCTGATAGTGCTTGATGACTTATGGGAACCTGAAGTCTGGGATGAGGTAGAAAGTTTATTTCCAAATAACAAAAGTGGCTACTGA 2289 0.3731 MCSCSYESDVIMNIVEEVSAKVPPEPLYIKHPIDFGSQFEVVESLLDTKSHDTLCMLILYGDVETKKSTFAGELYNKIKHQFQAASFLDKVRIKSRGIPNSLENLQETLLSGMCVHKKPRIGSTLKGSSDIKQSLHNKRVLLVLDDVDSIEQLDSLAGGSDWFGLGSRIIITTRDVNVLDKYELNGVKVMKYCIDEGEFKSMEGAKSNHEQDKDLQEDIVGFVEIFNEIVEKLKENESCTEVVSIIGMGGLGKTTLARKIYNNNKVKKLFSCCGWVTISKDYKAKDVLTSLVNGWGLSKSTTEYKVLSEKEQKSKVQEHLDRNKYLIVLDDLWEPEVWDEVESLFPNNKSGNTILITSRNDEVANYTRSKSYYPPFLDKNESWKLFCKVFGTQQCPPVLEMSIVVLCQNYASSSCYESDVIMNIVEEVSAKVPPEPLYIKHPIDFGSQFEVVESLLDTKSHDTLCMLILYGDVETKKSTFAGELYNKIKHQFQAASFLDKVRIKSRGIPNSLENLQETLLSGMCVHKKPRIGSTLKGSSDIKQSLHNKRVLLVLDDVDSIEQLDSLAGGSDWFGLGSRIIITTRDVNVLDKYELNGVKVMKYCIDEGEFKSMEGAKSNHEQDKDLQEDIVGFVEIFNEIVEKLKENESCTEVVSIIGMGGLGKTTLARKIYNNNKVKKLFSCCGWVTISKDYKAKDVLTSLVNGWGLSKSTTEYKVLSEKEQKSKVQEHLDRNKYLIVLDDLWEPEVWDEVESLFPNNKSGY 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03588 762 PRINTS Disease resistance protein signature 319 333 - -
Aip04g03588 762 PRINTS Disease resistance protein signature 505 519 - -
Aip04g03588 762 PRINTS Disease resistance protein signature 242 257 - -
Aip04g03588 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 625 757 IPR027417 -
Aip04g03588 762 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 188 IPR044974 GO:0006952
Aip04g03588 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 187 IPR027417 -
Aip04g03588 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 597 IPR027417 -
Aip04g03588 762 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 420 598 IPR044974 GO:0006952
Aip04g03588 762 Gene3D - 424 598 IPR027417 -
Aip04g03588 762 Gene3D - 14 188 IPR027417 -
Aip04g03588 762 Gene3D - 616 761 IPR027417 -
Aip04g03588 762 Gene3D - 206 372 IPR027417 -
Aip04g03588 762 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 221 388 IPR044974 GO:0006952
Aip04g03588 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 403 IPR027417 -
Aip04g03588 762 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 221 388 - -
Aip04g03588 762 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 188 - -
Aip04g03588 762 Pfam NB-ARC domain 41 185 IPR002182 GO:0043531
Aip04g03588 762 Pfam NB-ARC domain 451 595 IPR002182 GO:0043531
Aip04g03588 762 Pfam NB-ARC domain 637 760 IPR002182 GO:0043531
Aip04g03588 762 Pfam NB-ARC domain 227 393 IPR002182 GO:0043531
Aip04g03588 762 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 420 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03588 Aip-Chr4 130429180 130431889 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03588 452 597 WRKY Transcription Factor Family AT5G45050 29.730 1.80e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03588 - - ahf:112795437 798.505