Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03568 ATGTTTCCTTCTAGTTTCGGTAGTTATAGCTCTTACCCTTGTTACCCTTCATCTTCTTCTTCTTCACCATACCCTCCTTTCCCTTTCTTTAACCCTGAAAACAATAATAATGGTGCTAATAATTCAAACAACAACAACAGCAACAACAACAACACTTTCCTTCATGATCCAATTTCTAATAATGCTACTACTACTACTACTGTTATTCCTTACCATCATCATGCTCCAACAATCCCAGAAAGTGCACTGATGACAAATTTGGCAGTGGCAGATGCAATGTTCAAGCAAGAGTACTTCACTGCTGGTGGTGGTGGTGGTGGTGGTGGTTCTTCACACCACCATCATCACCATTATGGCATGTCAAGTTTGATAACAAAGAGGCCAGCACCAAAGAAAGATAGGCACAGCAAGATTCACACTTCTCAGGGCTTGAGGGACAGAAGGGTGAGGCTTTCTATTGAGATTGCACGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGATAAGGCCAGCAACACTCTTGAGTGGCTCCTAACAAAGTCAAAGAGAGCAATTAAGGAGTTAGCTAGGAGCAAGAACAGTAGCAGTGGTAATAACAATGGTGGTGTTGCCAATAATAACAGCTTCTCTTCTTCCTCTTCTGATGGGGTTGATGATGATGAAGTTGACTCAGTCATCAACCAACAACAACTCACTGATAATATTGATGGTACTCATGAACAAGGGGGTGTGGATTCATTAGAGAGGAGGCTGAGAAGGGATCAACAGAAGGATGAAGAATCAAGGGCAAAGATGAAGGAATCAAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAGGACTAGTAGCAAGATGTGCAACAGTGAGAAGGTGCAAGAGTTGAAGAAGAAAAGCCCTGCAATGGTAATGGAAGAAGATCCTCAGATTCTAATGCAGCACCAACAATTGAGGGCACCAATGATTCAACCTCTTGAGGAATCTTCAATGAGATCATCACCAAAGCTGTTTCAGCCTCATCATCTTGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGTAGTGAAGTCCCCAGAGATGATTTCAATGTTATTGAGGAATCCATTGTGATAAGGAGAAAGTTGAAGCAATCTTTGATGTCTTCTTCTTCTTCTTCTTCCAATAATCATCACCATCAAAATCATAATGTTATCCCTAAAGAAGCAACAAACTTCAACAACAACAACAGCAACAACAGTGACTACCACTGCTTTCCCAATTTATCATCACCAAATTGGGAATCTAATGCTTCTGCTGCCACTAATAATGGCCGCTCCAATGTTTGCACAATATCAAGCATGAATCTGTCTACAAGGCTTCAGATCTTTGGAAAGTCTTGGGAAGAGTGCACCAATCCCCACCTATGA 1419 0.4235 MFPSSFGSYSSYPCYPSSSSSSPYPPFPFFNPENNNNGANNSNNNNSNNNNTFLHDPISNNATTTTTVIPYHHHAPTIPESALMTNLAVADAMFKQEYFTAGGGGGGGGSSHHHHHHYGMSSLITKRPAPKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLLTKSKRAIKELARSKNSSSGNNNGGVANNNSFSSSSSDGVDDDEVDSVINQQQLTDNIDGTHEQGGVDSLERRLRRDQQKDEESRAKMKESREKARARARERTSSKMCNSEKVQELKKKSPAMVMEEDPQILMQHQQLRAPMIQPLEESSMRSSPKLFQPHHLAAAGGGGGGGGGGGGGSSEVPRDDFNVIEESIVIRRKLKQSLMSSSSSSSNNHHHQNHNVIPKEATNFNNNNSNNSDYHCFPNLSSPNWESNASAATNNGRSNVCTISSMNLSTRLQIFGKSWEECTNPHL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03568 472 MobiDBLite consensus disorder prediction 28 59 - -
Aip04g03568 472 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 315 IPR005333 GO:0003700
Aip04g03568 472 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 358 471 IPR005333 GO:0003700
Aip04g03568 472 MobiDBLite consensus disorder prediction 190 300 - -
Aip04g03568 472 MobiDBLite consensus disorder prediction 343 362 - -
Aip04g03568 472 ProSiteProfiles TCP domain profile. 131 189 IPR017887 -
Aip04g03568 472 ProSiteProfiles R domain profile. 267 284 IPR017888 -
Aip04g03568 472 MobiDBLite consensus disorder prediction 31 59 - -
Aip04g03568 472 Pfam TCP family transcription factor 130 287 IPR017887 -
Aip04g03568 472 Coils Coil 245 265 - -
Aip04g03568 472 MobiDBLite consensus disorder prediction 224 240 - -
Aip04g03568 472 MobiDBLite consensus disorder prediction 243 300 - -
Aip04g03568 472 MobiDBLite consensus disorder prediction 191 216 - -
Aip04g03568 472 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 358 471 - -
Aip04g03568 472 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 24 315 - -
Aip04g03568 472 MobiDBLite consensus disorder prediction 104 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03568 Aip-Chr4 130265468 130267853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03568 127 203 TCP Transcription Factor Family AT1G67260 66.234 1.42e-28 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip04g03568 TCP 5.7e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03568 - - aip:107637396 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03568 04 130265468 130267853 Aip04g03568 04 130265468 130267853 ECH