Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03555 ATGAAGTCGAAAAGAACCCGCAGCTGCACACTCTGCTTCCCCTGCCGAACCCTGTTGTTATTCCTGGTTCACGCTTTCGCGAGGTCTATTATTGGGACTCCTATTGGGTCATTCGGTTCGTTCTTCTACTATTTCTCTTTCTCTTTCTCTTTCTCTTTTCAGAGCATTATAAGGAATAATGATGCATTCATTTTTGAGTGGTGCAGGGGCTTGCTGGTGAGTAAAATGCATAAGACTGCTACTGCTATTGTGATGAATCTTGTTTCTTTAATAGAAAAATATGGATTTGTGCTCAATGGGGCTAGACAGTACTACACTAACAGGAGTCAGCCTCCTCTTTTAAGCTCTATGATTTATGAGATATACCGCATCACTGGTGACATTGAGTTAGTTAAAAGATGTTTACCTGCACTGCTTAAGGAGCATGCCTTTTGGAATTCAGATATACATAGAGTGACCATTGTGGATGCTCAAGGACACTCCCATAACTTGAATCGCTATCAGGCAATGTGGAACAAACCCAGGCCAGAGTCGTCCACAATGGACAAGAAATCTGCTTCCAAGTTCTTAAATATTTCAGAAAAGCAGCATTTTTACCGTGATATTGCCTCGGCTGCTGAATCAGGATGGGATTTCAGCACAAGATGGATGAGAGTTCCACCTGACTACAGTACACTAGCTACAACATCTGTAATACCTGTTGATTTGAATGCATATCTGCTTGGGATGGAAATTAATATTGCCTTCTTTGCAAAAGCTATTGGAGACGAAACCACTGTGAAACACTTCATGGAACTTTCTGATGCTAGAAAGAAGGCAATAAATTCTGTTTTCTGGAGTCCAAGCAAGAAGCAATGGCTCGATTACTGGCTCAACAGTGGCACATGTGAGGTGGCTCATGTTTGGGAAGATAAGCATCAGAATAAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGGAGCCATTTTACTCAGATGGTTCGCTTGTGGGTAACGTTGTTCATGCTCTCAAAACTTCTGGCCTGATTCGTGCTGCCGGAATTGCAACTTCTTTGACTGATTCAGGACAACAGTGGGACTTTCCAAATGGTTGGGCTCCACTTCAACACATGCTAGCAGAAGGCCTGGTAAAATCAGGGTCAAAAGAAGCAAGGTTGTTGGCTGAGGAAATTGCTATCAAATGGATTAGAAGCAATTATGTTAGTTACAAGAAAACGGGGGTAATGCATGAAAAGCTTGACGTGGAGAAGTGTGGAGAATATGGAGGCGGGGGTGAATATGCACCCCAGACTGGATTTGGTTGGTCTAACGGGGTTGTGTTGGCATTCTTGGAAGAGTTTGGTTGGCCTCAAGATCGGAGTATAGATTGTTGA 1377 0.4263 MKSKRTRSCTLCFPCRTLLLFLVHAFARSIIGTPIGSFGSFFYYFSFSFSFSFQSIIRNNDAFIFEWCRGLLVSKMHKTATAIVMNLVSLIEKYGFVLNGARQYYTNRSQPPLLSSMIYEIYRITGDIELVKRCLPALLKEHAFWNSDIHRVTIVDAQGHSHNLNRYQAMWNKPRPESSTMDKKSASKFLNISEKQHFYRDIASAAESGWDFSTRWMRVPPDYSTLATTSVIPVDLNAYLLGMEINIAFFAKAIGDETTVKHFMELSDARKKAINSVFWSPSKKQWLDYWLNSGTCEVAHVWEDKHQNKNVFASNFVPLWMEPFYSDGSLVGNVVHALKTSGLIRAAGIATSLTDSGQQWDFPNGWAPLQHMLAEGLVKSGSKEARLLAEEIAIKWIRSNYVSYKKTGVMHEKLDVEKCGEYGGGGEYAPQTGFGWSNGVVLAFLEEFGWPQDRSIDC 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03555 458 SUPERFAMILY Six-hairpin glycosidases 68 451 IPR008928 GO:0005975
Aip04g03555 458 PRINTS Glycosyl hydrolase family 37 signature 94 112 IPR001661 GO:0004555|GO:0005991
Aip04g03555 458 PRINTS Glycosyl hydrolase family 37 signature 352 368 IPR001661 GO:0004555|GO:0005991
Aip04g03555 458 PRINTS Glycosyl hydrolase family 37 signature 231 248 IPR001661 GO:0004555|GO:0005991
Aip04g03555 458 PRINTS Glycosyl hydrolase family 37 signature 164 181 IPR001661 GO:0004555|GO:0005991
Aip04g03555 458 PRINTS Glycosyl hydrolase family 37 signature 199 216 IPR001661 GO:0004555|GO:0005991
Aip04g03555 458 PRINTS Glycosyl hydrolase family 37 signature 274 290 IPR001661 GO:0004555|GO:0005991
Aip04g03555 458 PRINTS Glycosyl hydrolase family 37 signature 432 445 IPR001661 GO:0004555|GO:0005991
Aip04g03555 458 PANTHER TREHALASE 68 458 IPR001661 GO:0004555|GO:0005991
Aip04g03555 458 PANTHER TREHALASE 68 458 - -
Aip04g03555 458 Pfam Trehalase 68 449 IPR001661 GO:0004555|GO:0005991
Aip04g03555 458 Gene3D - 14 456 IPR012341 GO:0005975
Aip04g03555 458 ProSitePatterns Trehalase signature 2. 359 368 IPR018232 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03555 Aip-Chr4 130113941 130118098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03555 68 458 Trehalose Biosynthesis Gene Families AT4G24040 61.381 3.31e-168 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03555 K01194 - gmx:547539 632.869