Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03549 ATGGCTTCAACTTCTCCTTCTCCAAATGCATCACCTTCTGCAATTCCACCAGAATCTTCTGCTAATCCACCACCACCATCACAACCATCTCCATCTTCTCCTTCTAAGCCAAATCAAACCTCTGACACCCCTGCACCTTCATCTCCTTCTACCCCTTCTTCAGCTTCACCTCCTTCTCCTTCAGTTCCTGTAACCTCTCCTCCTACCCCATCCCTTTCACCTCCACCATCATCTACTACACCTCCACCAACTCCATCCCCTCCTTCACCACCAGATTCTCCACCACCCTCAACACCAGCATCACCTCCACCTTCAGTTGCATCCTCACCACCACCACCAGCTGCCACTGCTGCCCCTCCTCCTGCCAAGACTTCCCCTTCGGTTCCAAGTTCGTCCCCACCGCCTCCCGTAGCCAGTTCCCCTCCACCTCAACCCTCACAGGCACCTCCTAAATCAACTCCACCTCCTTCTCAACCAGTTTCACCATCTCCTCCACCTCCAGCCAATGTGCCAAGGCCAACACCATCCACCCCTACTCCGCCGAAGGGAAAGCCACCAGAGAGTTCTCCTCTGCCGCCTTCGCCTCCTTCACAACATGCATCCCCTCCTTCTGTTTCTAAACCTGCTCCTTCCACTGATGCTCCCCCTCCATCAACATTGCCATCCACTCCTCCTGCACCTCCTTCCAAAGATGTCCCTGCTCCATCCACATTGCCATCAACTCCTCCTTCAGTCCCTTCGGCGTCTTCACCTCCATCGTCTTTGTCTCGTCCCTCTAATAATGGAACAGCAGCGGGGGCTCCAGCCGAGTCCTTACCCTCTTTTCCAACTGAGAAACCCACTGCTAAACCAACTAATGATGGCACCGATAATATAACCTCGAATACCCCATCTTCACATTCAAAAGGGTTAGGTTCTGGAGGAGCTGTGGCCATTGCCGTTATAGCTGGCTTTTTTGTTCTCAGCCTTCTTGTTATGGCTTTGTGGTTTTCAAAGAAAAAGAAGAAAGGAAAGGGACCAAAAGCTGGTTATACTTTGCCTTCACCATTTACCTCGTCTCACAATTCAGGTACATTATTCTTGAGGCCACAATCACCAGCTAACTACTTAGGTAGTGGTTCTGGTGGTGATTTTGTGTATTCACCATCAGAGCCAGGTGCTGTAAGTAGTTCAAGATCATGGTTCACATACGAAGAACTTATCCAAGCTACAGATGGGTTTTCTCCAAAAAATCTATTGGGAGAAGGTGGATTTGGTGCGGTCTACAAAGGTATGCTCTTTGATGGAAGAGTAGTGGCTGTGAAACAGCTTAAAGTTGGTGGCGGGCAAGGGGAACGCGAATTTAGAGCAGAAGTTGAGATTATTAGCCGTGTGCATCATCGCCATCTTGTTTCCCTGGTGGGCTATTGTATATCTGAGCATCAAAGATTGCTTGTCTATGACTATGTTGCTAACAACACACTTCATTACCATCTTCATGGTGAAAACAGACCAGTTTTGGATTGGCCTACCAGAGTCAAGGTTGGAGCTGGGGCTGCTCGAGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATCATTCATCGGGATATTAAGTCATCAAACATCCTGCTTGACAATAACTTCGAAGCTCAAGTTTCAGACTTTGGACTTGCAAAATTGGCTCTGGATTCAAATACACATGTTACTACCCGAGTGATGGGAACCTTTGGGTACATGGCACCAGAGTATGCAACAAGCGGAAAATTGACTGAAAAGTCCGATGTATATTCCTTTGGTGTGGTGCTTTTGGAGCTAATTACCGGTCGGAAGCCTGTAGATGTCTCTCAGCCTATCGGTGACGAAAGCCTGGTTGAATGGGCTCGGCCTCTGTTGATAGAAGCACTTGATAACGAGGACCTCGAAATCTTGGTGGATCCAAGACTGGAAAAGAACTACAACAGAGATGAAATGTTCCGGATGATTGAGGCTGCTGCAGCCTGTGTTCGCCACTCAGCAATAAAGAGGCCACGGATGAGTCAGGTGGTAAGAGCTTTAGATTCCTTAGACGAAAATTCTGATCTCAACAACGGAATCAGACCGGGGCAGAGTTCAGTCTTCGATTCTGCGCAACAATCCGCACAGATCAGAATGTTTAGAAGGATGGCTTTTGGTAGCCAAGATTACAGTTCCAGTTTCTTTAATGAGTCTCAAAGTAGCTGGATGAGTAGAGAGCAACATGACTCAACAACCATGAATAGATCAGGACCTAGGAATATTATTTGA 2268 0.4802 MASTSPSPNASPSAIPPESSANPPPPSQPSPSSPSKPNQTSDTPAPSSPSTPSSASPPSPSVPVTSPPTPSLSPPPSSTTPPPTPSPPSPPDSPPPSTPASPPPSVASSPPPPAATAAPPPAKTSPSVPSSSPPPPVASSPPPQPSQAPPKSTPPPSQPVSPSPPPPANVPRPTPSTPTPPKGKPPESSPLPPSPPSQHASPPSVSKPAPSTDAPPPSTLPSTPPAPPSKDVPAPSTLPSTPPSVPSASSPPSSLSRPSNNGTAAGAPAESLPSFPTEKPTAKPTNDGTDNITSNTPSSHSKGLGSGGAVAIAVIAGFFVLSLLVMALWFSKKKKKGKGPKAGYTLPSPFTSSHNSGTLFLRPQSPANYLGSGSGGDFVYSPSEPGAVSSSRSWFTYEELIQATDGFSPKNLLGEGGFGAVYKGMLFDGRVVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVANNTLHYHLHGENRPVLDWPTRVKVGAGAARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPIGDESLVEWARPLLIEALDNEDLEILVDPRLEKNYNRDEMFRMIEAAAACVRHSAIKRPRMSQVVRALDSLDENSDLNNGIRPGQSSVFDSAQQSAQIRMFRRMAFGSQDYSSSFFNESQSSWMSREQHDSTTMNRSGPRNII 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03549 755 MobiDBLite consensus disorder prediction 34 49 - -
Aip04g03549 755 Pfam Protein tyrosine and serine/threonine kinase 411 680 IPR001245 GO:0004672|GO:0006468
Aip04g03549 755 Gene3D Phosphorylase Kinase; domain 1 382 482 - -
Aip04g03549 755 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 134 737 - -
Aip04g03549 755 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 134 737 - -
Aip04g03549 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Aip04g03549 755 MobiDBLite consensus disorder prediction 278 303 - -
Aip04g03549 755 MobiDBLite consensus disorder prediction 734 755 - -
Aip04g03549 755 MobiDBLite consensus disorder prediction 50 249 - -
Aip04g03549 755 MobiDBLite consensus disorder prediction 250 267 - -
Aip04g03549 755 Gene3D Transferase(Phosphotransferase) domain 1 483 699 - -
Aip04g03549 755 PRINTS Proline rich extensin signature 1 17 - -
Aip04g03549 755 PRINTS Proline rich extensin signature 18 34 - -
Aip04g03549 755 PRINTS Proline rich extensin signature 36 53 - -
Aip04g03549 755 PRINTS Proline rich extensin signature 63 88 - -
Aip04g03549 755 SMART serkin_6 407 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03549 755 MobiDBLite consensus disorder prediction 10 33 - -
Aip04g03549 755 ProSitePatterns Protein kinases ATP-binding region signature. 413 435 IPR017441 GO:0005524
Aip04g03549 755 SUPERFAMILY Protein kinase-like (PK-like) 383 680 IPR011009 -
Aip04g03549 755 MobiDBLite consensus disorder prediction 1 305 - -
Aip04g03549 755 ProSiteProfiles Protein kinase domain profile. 407 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03549 Aip-Chr4 130001705 130006822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03549 278 740 Trihelix Transcription Factor Family AT5G38560 69.703 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Aip04g03549 PK_Tyr_Ser-Thr 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03549 - - gmx:100784873 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03549 04 130001705 130006822 Aip04g03549 04 130001705 130006822 ECH