Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03522 ATGTGGAAGGTGGTGAAGCCGGTGGTGGTGATGGTGATTGTGCAGATAGCAAATGCATGGATGAATGTTCTCTACAAGCTTGCTGTCAACGATGGCATGAGCCTCAGAGTAGCTGTTGCCTACCGCTATATCTTCGCTACTGCTTTCATTGCTCCTCTTGCTTATATTCTCGAGAGGAAGACAAGGACAAAGATGACTTGGACCATTCTCTTTCAGTCATTCTTGTGCGGTTTATTTGGGGGAGCATTGGCTCAGAACTTACAAATGGAAGCGCTTGCTTTAACTTCTGTAACATTTGCAACCGCCATATCCAACCTGATTCCGGCCATCACCTTCATCTTGTCCCTCTTCTTTGGAATGGAGAAATTGAATATGAGAAAAGCAGCAGGAAAGGCAAAGATAATAGGAACAATGACTGGAATTGGCGGAGCAATGTTGATGACATTCTATAAAGGCGTGGAAGTTAAGATGCTATCCTTTCACATTAACCTCTTCAATCAGCGAAATGGCGGCGGCTCGTCACATGGTGGCGGAGGGTTATTCTTGGTGGGTGCTGTGTCGTCGTTCTTCTTCAACGCGTCTTATGCATTGTGGCTGATCATTCAGGCGAAGATGAGTAGCGCATATCCGTATCCCTATTCAAGCACTGCACTCATGTGTTTAATGGCCGCACTTCTATCTGTTATCTTCACATTTTGTGTTGAGAGGGATTTGAGTCAATGGAAGTTGGGTTGGAATGTCAGGCTATTCACTGTAGCTTACGCTGGTATAGTGGTTTCGGGAGTGATGGTGGCTGTGACATCGTGGTGCTTACGCATGAAAGGTCCATTGTTTGTCTCTGTTTTTAGTCCTCTCATGCTAGTGGTTGTTGCTTTTGCTGGATCCACCATTCTTGATGAGAAGCTATATCTTGGAAGCATAATTGGATCGTTGTTGATTGTGTGCGGCTTATACCTGGTTCTGTGGGGTAAAAGCAAAGAGATGGTGAAAAATGAATTAGTGCCAATGTGCCATCAATAG 1020 0.449 MWKVVKPVVVMVIVQIANAWMNVLYKLAVNDGMSLRVAVAYRYIFATAFIAPLAYILERKTRTKMTWTILFQSFLCGLFGGALAQNLQMEALALTSVTFATAISNLIPAITFILSLFFGMEKLNMRKAAGKAKIIGTMTGIGGAMLMTFYKGVEVKMLSFHINLFNQRNGGGSSHGGGGLFLVGAVSSFFFNASYALWLIIQAKMSSAYPYPYSSTALMCLMAALLSVIFTFCVERDLSQWKLGWNVRLFTVAYAGIVVSGVMVAVTSWCLRMKGPLFVSVFSPLMLVVVAFAGSTILDEKLYLGSIIGSLLIVCGLYLVLWGKSKEMVKNELVPMCHQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03522 339 Pfam EamA-like transporter family 8 147 IPR000620 GO:0016020|GO:0016021
Aip04g03522 339 Pfam EamA-like transporter family 190 321 IPR000620 GO:0016020|GO:0016021
Aip04g03522 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 136 - -
Aip04g03522 339 PANTHER WAT1-RELATED PROTEIN 8 335 - -
Aip04g03522 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 325 - -
Aip04g03522 339 PANTHER WAT1-RELATED PROTEIN 8 335 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03522 Aip-Chr4 129661747 129669423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03522 1 339 Nodulin-like Gene Family AT1G68170 43.953 3.80e-98 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03522 - - adu:107486536 593.964