Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03521 ATGGGGACTCCAAGAGGAAGAGGAAGTGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGTTCTTCTTCTTCCATGTTCTGTTGCATTTTTCTTGTTTTTTAGCACTGCAACTGCTTTGCTTTCTCCCAAAGGAGTAAACTTTGAAGTTCAAGCTTTAATGGGGATAAAGAACTCACTGGTGGATCCTCATGGTGTTTTGGATAATTGGGATGCTGATGCTGTTGATCCTTGTAGCTGGACTATGGTTACTTGTTCTGCAGAAAACTTGGTGATTGGATTGGGTACTCCAAGTCAAAGTTTATCTGGTACTCTTTCTCCAACCATAGGAAACTTAACCAACCTTCAGATTGTGTTGCTTCAGAATAACAACATAACTGGACCAATCCCTTCAGAGTTGGGAAAACTTCCTAAGCTTCAAACTCTTGATCTCTCTAACAACTTCTTCAGTGGTGAAATTCCCCCCTCACTTGGTCACTTGAGAAGTTTGCAATACATGAGGCTCAATAATAATAGTCTTCATGGTGAATTGCCAGAATCATTGGCTAATATGACACAGCTTGCTTTTCTTGACTTGTCCTACAACAATATCAGTGGCCCTATACCAAGAATTTTAGCTAAATCCTTCAACATTGTTGGAAATCCCCTTGTTTGTGCAACTGGAAAAGAACCAAACTGCCATGGCATGACACTGATGCCAATGTCCATGAACTTAAATGGCACTGAAGATGCCTTACCATCAAGCAAACCAAAATCTCATAAAATGGCAATTGCTTTTGGCTTGAGTCTTGGATGTCTCTGCCTCATAGTTCTTGGTTTTGGCCTTGTTCTTTGGTGGAGGCACAAGCACAATCAACAAGCATTCTTTGATGTGAAAGACCGGCATCATGAAGAAGTATACCTTGGAAACTTGAAGAGGTTCCAATTCAGAGAACTCCAAGTTGCTACCAATAACTTCAGCAGCAAGAACATTCTTGGAAAGGGTGGTTTTGGAAATGTCTATAAAGGAGTTCTCTCTGATAGCACTCTTGTAGCTGTCAAGAGGCTGAAAGATGGCAATGCCATTGGAGGAGAGATTCAGTTTCAGACTGAAGTCGAAATGATCAGCCTCGCCGTCCACCGGAACCTCCTCAGACTCTATGGATTCTGCATGACACCAACAGAAAGGCTCTTAGTTTACCCTTACATGTCCAATGGCAGCGTCGCTTCACGTCTAAAGGGTAAGCCGGTGTTGGATTGGGGAACAAGGAAGAACATTGCATTAGGAGCAGCAAGGGGGCTATTATATCTTCATGAGCAATGTGATCCAAAGATAATACATAGGGATGTGAAGGCTGCAAACATATTGCTTGATGACTATTGTGAAGCAGTGGTTGGTGATTTTGGGTTGGCAAAGCTTCTGGATCATCAAGATTCACATGTCACAACTGCAGTTAGAGGCACTGTAGGACACATAGCCCCAGAGTATCTATCTACAGGACAATCATCTGAGAAAACTGATGTGTTTGGATTTGGGATTCTCCTCTTGGAATTGATCACAGGACAAAGGGCACTAGAGTTTGGAAAAGCTGCTAACCAAAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCATCAGGAGAAGAAGCTAGAGTTGCTTGTGGACAAGGATCTTAAAGGGAACTATGACAGGATTGAACTTGAGGAAATGGTTCAAGTGGCATTGTTATGTACTCAAAACCTTCCAGGGCATAGACCAAAGATGTCTGAAGTTGTAAGAATGCTTGAAGGTGATGGATTAGCAGAGAGATGGGAAGCTTCACAAAGAGCTGATACTAGTGCTGCTGCTACTGCTACTACTAACACTTCAAAATCCAAACCTCATGAATCATCTTTATCAGATAGGTATTCTGATCTCACTGATGATTCCTTGTTGTTAGTCCAAGCCATGGAGCTATCAGGACCAAGGTGA 1962 0.4251 MGTPRGRGSGRGRGRGRGRGGGGGVLLLPCSVAFFLFFSTATALLSPKGVNFEVQALMGIKNSLVDPHGVLDNWDADAVDPCSWTMVTCSAENLVIGLGTPSQSLSGTLSPTIGNLTNLQIVLLQNNNITGPIPSELGKLPKLQTLDLSNNFFSGEIPPSLGHLRSLQYMRLNNNSLHGELPESLANMTQLAFLDLSYNNISGPIPRILAKSFNIVGNPLVCATGKEPNCHGMTLMPMSMNLNGTEDALPSSKPKSHKMAIAFGLSLGCLCLIVLGFGLVLWWRHKHNQQAFFDVKDRHHEEVYLGNLKRFQFRELQVATNNFSSKNILGKGGFGNVYKGVLSDSTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKNIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHQEKKLELLVDKDLKGNYDRIELEEMVQVALLCTQNLPGHRPKMSEVVRMLEGDGLAERWEASQRADTSAAATATTNTSKSKPHESSLSDRYSDLTDDSLLLVQAMELSGPR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03521 653 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 30 653 - -
Aip04g03521 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Aip04g03521 653 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 30 653 - -
Aip04g03521 653 Pfam Leucine Rich repeats (2 copies) 117 157 IPR025875 -
Aip04g03521 653 Gene3D Phosphorylase Kinase; domain 1 292 399 - -
Aip04g03521 653 SUPERFAMILY Protein kinase-like (PK-like) 300 593 IPR011009 -
Aip04g03521 653 SMART serkin_6 323 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03521 653 MobiDBLite consensus disorder prediction 603 633 - -
Aip04g03521 653 MobiDBLite consensus disorder prediction 607 624 - -
Aip04g03521 653 Pfam Leucine rich repeat N-terminal domain 53 90 IPR013210 -
Aip04g03521 653 Gene3D Transferase(Phosphotransferase) domain 1 400 612 - -
Aip04g03521 653 ProSiteProfiles Protein kinase domain profile. 323 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03521 653 Gene3D Ribonuclease Inhibitor 50 232 IPR032675 -
Aip04g03521 653 SUPERFAMILY L domain-like 53 215 - -
Aip04g03521 653 Pfam Protein kinase domain 324 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03521 653 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03521 Aip-Chr4 129639407 129643433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03521 25 653 Receptor kinase-like Gene Family AT5G16000 76.995 0.0 1007
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip04g03521 Pkinase 6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03521 - - gmx:100798412 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03521 04 129639407 129643433 Aip04g03521 04 129639407 129643433 ECH