Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03518 ATGGAAGTTGGAGTAGTGCCAGAATCATCAATCAGCAATGGATCAATTTGCCATTCAAGACCACCAAAGGGAACAATTGACCTATTTTCAGGACCTACCCCAATGCAAATGAGTTCATATCTCACTCCAATGGACAGAGAAGCCAGAGTCCTAAGGTATAGAGAGAAGAAGAAGACAAGAAAATTCGAGAAGACCATAAGGTATGCATCAAGAAAGGCCTATGCAGAGACTCGGCCGCGAATCAAAGGCCGATTCGCCAAGAGAACTGATGTTGAAGCTGAAGTTGATCAGATGTTCTCCACACCATTGATTACAGAAGTTGGTTATGGCATTGTTCCTTCATTCTGA 348 0.431 MEVGVVPESSISNGSICHSRPPKGTIDLFSGPTPMQMSSYLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTPLITEVGYGIVPSF 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03518 115 MobiDBLite consensus disorder prediction 1 24 - -
Aip04g03518 115 Pfam CCT motif 46 88 IPR010402 GO:0005515
Aip04g03518 115 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 1 115 IPR045281 GO:0009909
Aip04g03518 115 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 1 115 - -
Aip04g03518 115 ProSiteProfiles CCT domain profile. 46 88 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03518 Aip-Chr4 129623016 129623363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03518 1 115 C2C2-CO-like Transcription Factor Family AT3G02380 68.696 4.62e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip04g03518 CCT 1.4e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03518 - - ahf:112744683 224.557