Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03511 ATGCAAGCCTTAAGGGATGAAATCACAGGCCTTAATAATAATTATTTTCTCCCTTCAGAAACATATAACTATACTACCTCCATGATGCAAAATACCAACAATACCCTTACCTCTTTTCATCCATACAATAACAACAAGAACCAATTCTATAATGGCAATAATAATTTCCTTAATCAAATGCTTTTTCCACCAGAATTTATTCTTGGCAACAATAGTCCTACTCAATCATCATGCATAAGTAGCAACAACTCAACCTCAGATGAAGCAGACGAACAACAACAACAACAACAAAGCCTTATCCTGAACGAGAGGAAACACAGGAGGATGATATCGAACCGGGAATCGGCTCGCCGGTCCCGGATGAGAAAGCAAAAACACCTTGATGAGCTTTGGTCACAGGTTGTTTGGCTGAGGAATGAGAATCACCAATTATTGGACAAATTAAACAATGTTTCAGAGTCACATGATAAAGTTGTTCAAGAGAATGTTCAATTGAGAGAAGAGGCTTCAGAACTTCGCCAAATGCTTTGTGACATGCAGCTACATAGTCCAATTTGCCCTCCTCCTTTGAGTCCTTTTCATCATGATGAAGAAGAAGAAGAAGAATATCTCAACTATGATGATGATTCCTCAAACCAATCCAACACCACAAGTTCTATGAACCTACTCGGATAA 675 0.3852 MQALRDEITGLNNNYFLPSETYNYTTSMMQNTNNTLTSFHPYNNNKNQFYNGNNNFLNQMLFPPEFILGNNSPTQSSCISSNNSTSDEADEQQQQQQSLILNERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLLDKLNNVSESHDKVVQENVQLREEASELRQMLCDMQLHSPICPPPLSPFHHDEEEEEEYLNYDDDSSNQSNTTSSMNLLG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03511 224 MobiDBLite consensus disorder prediction 73 97 - -
Aip04g03511 224 CDD bZIP_plant_GBF1 105 156 IPR045314 GO:0003700|GO:0006355
Aip04g03511 224 Pfam bZIP transcription factor 104 156 IPR004827 GO:0003700|GO:0006355
Aip04g03511 224 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 6 211 IPR044521 -
Aip04g03511 224 SMART brlzneu 100 164 IPR004827 GO:0003700|GO:0006355
Aip04g03511 224 PANTHER BZIP TRANSCRIPTION FACTOR 6 211 - -
Aip04g03511 224 SUPERFAMILY Leucine zipper domain 104 153 IPR046347 GO:0003700|GO:0006355
Aip04g03511 224 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 107 122 IPR004827 GO:0003700|GO:0006355
Aip04g03511 224 MobiDBLite consensus disorder prediction 188 224 - -
Aip04g03511 224 Gene3D - 102 157 - -
Aip04g03511 224 Coils Coil 148 175 - -
Aip04g03511 224 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 102 165 IPR004827 GO:0003700|GO:0006355
Aip04g03511 224 MobiDBLite consensus disorder prediction 208 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03511 Aip-Chr4 129551227 129552183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03511 64 185 bZIP Transcription Factor Family AT3G30530 70.400 8.59e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip04g03511 bZIP_1 5.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03511 - - adu:107486353 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03511 04 129551227 129552183 Aip04g03511 04 129551227 129552183 ECH
Aip10g03442 10 132973199 132982382 Aip04g03511 04 129551227 129552183 PCT