Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03497 ATGGGTTCATCAATCCTTGGCCCCAAAGAAATTGAGATGTTTGAAGGGCAAGCTTTATTGTATAGACAGTGTTGTGCCTACATAGATTCCATGTGTATTAAGTGGTGTGTTGAGCTCAACATAGCAGACATAATTCACAACCATGGTCAACCCATTACCCTTCATCACTTGGTCTCAACATTGCAAGTTCCATCTTCCAGGGTTGCCGCTGTTCGACGCTTCATGCGTTACCTCGCACATAATGGATTATTTCACATAGTAAGAATCCATGACGAAAACAAACAAGAGAAGGAAGCATATGGTCTCACCATTGCATCAAAGCTCCTTGTTAGTAGCAATGATTATTGTTTATCTCCAATGGTTAAGTATGCTACTGATCCAGTTACAATGGGTCCACTCAATCAATTGAAGGCATGGATTTATGGGGAAGATAATCTCTCACTATTTGGCATGGCCAAAGGAATGGAATTTTGGGAGTTTCTCAACATAAACCCTAAATATCTGAAGTCCTTCAATGAGGCAATGGCTTGTGACTCTAAAATGATTAACTTGGCATTAAGAAGTTGTGGTTTGGTCTTTGATGGGCTTGAATCCATTGTGGATGTTGGTGGTGGAATTGGAACAACTGCTAAGATTATTAGTGAGGCATTTCCTAAGTTGAAATGCATAGTATTTGATCTTCCCCAGGTTGTGGAAAATTTGTTAGGAACCAATAATTTGAGCTTTGTTGGTGGTGACATGTTCAAATCTATTCCTAAAGCACATGCAGTTCTACTCAAGAATATTATACATGATTGGGATGAGGAAAATTGTGTGAAGATAATGAGAAATTGTAAAGATGCTATTTCCAGCAATGGGAAAAGAGGAAAAGTGATTATTATAGAGTCTGTGATCAATGAAAAGCAGGACAAGCATGAAATCACTGAAATGAAGCTCAAATATGATATATACATGACATGTAACAATGGAGCACAGAAAACTGAAGAAGAATTGAAGAAAATCTTTATAGAAGCAGGCTTTCAAGGGTACAAACTGTTCCCTATAGCTGGAATTGTGTCACTTGTTGAGGTCTATCCTTAA 1080 0.3815 MGSSILGPKEIEMFEGQALLYRQCCAYIDSMCIKWCVELNIADIIHNHGQPITLHHLVSTLQVPSSRVAAVRRFMRYLAHNGLFHIVRIHDENKQEKEAYGLTIASKLLVSSNDYCLSPMVKYATDPVTMGPLNQLKAWIYGEDNLSLFGMAKGMEFWEFLNINPKYLKSFNEAMACDSKMINLALRSCGLVFDGLESIVDVGGGIGTTAKIISEAFPKLKCIVFDLPQVVENLLGTNNLSFVGGDMFKSIPKAHAVLLKNIIHDWDEENCVKIMRNCKDAISSNGKRGKVIIIESVINEKQDKHEITEMKLKYDIYMTCNNGAQKTEEELKKIFIEAGFQGYKLFPIAGIVSLVEVYP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03497 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 359 IPR016461 GO:0008168
Aip04g03497 359 Gene3D Vaccinia Virus protein VP39 111 359 IPR029063 -
Aip04g03497 359 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Aip04g03497 359 PANTHER O-METHYLTRANSFERASE 3 358 IPR016461 GO:0008168
Aip04g03497 359 PIRSF O-mtase 2 359 IPR016461 GO:0008168
Aip04g03497 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 358 IPR029063 -
Aip04g03497 359 SUPERFAMILY "Winged helix" DNA-binding domain 12 113 IPR036390 -
Aip04g03497 359 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 3 358 - -
Aip04g03497 359 Pfam O-methyltransferase domain 135 341 IPR001077 GO:0008171
Aip04g03497 359 Gene3D - 4 109 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03497 Aip-Chr4 129442072 129444454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03497 1 357 Monolignol Biosynthesis Gene Families AT5G54160 30.769 1.30e-47 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03497 K22588 - gmx:100813225 449.899