Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03496 ATGGATTTACTAAGTGGTCGCAAAGCAAATGAGATTTTTGAAGGGCAAGTTCATGTGTACAAACATATATTTGCTCACTTAGATTCTATGTGCCTTAAATGGTGCATTGAGTTAGAAATACCAACCATAATCTACAACCATGAAAAACCCATCACCCTTCATGAATTGATATCAATTTTACAAGTTCCACCATCCAAAATTAGTGGTGTGGAACGTCTTATGCGCCACCTAAGTCACAATGGATTCTTTGATATTGTAACAATCCATGATGATGACGATGAAAACAAAGAAGAAAAAGAAGCATATGCTCTCACTATTGCTTCTGAGCTTCTTGTTAAAGGCACTGAATATTGTTTAACTCCAATGGCTAAGTGTGGTCTTAATCCACTTATGTCAAGTTCTTTTAACTTATTAGGAAAATGGACTTTAGAAGAAAATCTTAGTTTATCTGAAATTTCCCTTGGAACAAATCTTTGGGACTTTCTTAGCAAAAACCCTTCAATTTTGACTTCCTTTAATGAGTCAATGGCTAGTGACTCTCAAATGGTGAAGTTGGCATTGAAAGATCATAGTGCTGTTTTTGAAGGGTTGGAATCTATTGTAGATGTTGGTGGTGGAAATGGAACCATATCTAAGATTATTAGTGACATGTTTCCCAAATTGAAGTGCATAGTGTTTGACCTTCCACATGTTGTGGAGAATTTTTCAGGAACCAGCAGCAACAATTTAAGCTTTATTGGTGGAGACATGTTCAATTTTATACCTGAGGCTGATGCTGTTCTACTTAAGTGGATTCTACATGATTGGGATGATGAAGATTGTGTAAAGATATTGAAGAAATGCAAAGATGCAATTTCAAAGAATACTAAAGGAGGAAAAGCAATTATCATAGATTATGTGATAAATGAAAAACAAGATGAATTTGGACTTACTCAAATGAAGCTCAGAATGGATATTGCCATGACAAGTGTGAATGGAAAGGAGAGAAGTGAAGAGGAAATCAAGAAGCTTTTTTTGGAAGCAGGCTTTCAAGATTATAAAATATTTCCTTTAACCGGAATGTATTCTCTTATTGTGGTTTATCCATAA 1089 0.348 MDLLSGRKANEIFEGQVHVYKHIFAHLDSMCLKWCIELEIPTIIYNHEKPITLHELISILQVPPSKISGVERLMRHLSHNGFFDIVTIHDDDDENKEEKEAYALTIASELLVKGTEYCLTPMAKCGLNPLMSSSFNLLGKWTLEENLSLSEISLGTNLWDFLSKNPSILTSFNESMASDSQMVKLALKDHSAVFEGLESIVDVGGGNGTISKIISDMFPKLKCIVFDLPHVVENFSGTSSNNLSFIGGDMFNFIPEADAVLLKWILHDWDDEDCVKILKKCKDAISKNTKGGKAIIIDYVINEKQDEFGLTQMKLRMDIAMTSVNGKERSEEEIKKLFLEAGFQDYKIFPLTGMYSLIVVYP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03496 362 CDD AdoMet_MTases 200 301 - -
Aip04g03496 362 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 4 361 - -
Aip04g03496 362 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Aip04g03496 362 Pfam O-methyltransferase domain 152 344 IPR001077 GO:0008171
Aip04g03496 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 360 IPR029063 -
Aip04g03496 362 PANTHER O-METHYLTRANSFERASE 4 361 IPR016461 GO:0008168
Aip04g03496 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Aip04g03496 362 Gene3D - 5 111 IPR036388 -
Aip04g03496 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 362 IPR016461 GO:0008168
Aip04g03496 362 Gene3D Vaccinia Virus protein VP39 112 362 IPR029063 -
Aip04g03496 362 SUPERFAMILY "Winged helix" DNA-binding domain 10 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03496 Aip-Chr4 129401897 129428989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03496 70 362 Monolignol Biosynthesis Gene Families AT1G51990 32.660 2.33e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03496 K22588 K13262 gmx:100813225 452.21