Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03495 ATGGAGTTGCTAAGTGAGTGCAAGGCAAGTGAGATATTTGAAGGACAAGTTGTTGTCTACAAACACCTTTATGCATACCTAGATTCCATGTGTCTCAAATGGTGTCTAGACCTCAACATGCCTGACATAATCCACAACCATGGCCAACCCATTACCCTTCATCACTTGGCCTCAACATTGCAAGTTCCGCCGTCCAAAATCGACGGCGTTCGCCGCTTCATGCGCCACCTTGCTCACAATGGATTCTTCCACATAACAAGACTACTCCATGATGATAATGAAGAAAAGGAAGCATATGCTCTCACTATTGCTTCAAAGCTTCTTGTCAAAGGAACTCAACATTCTTTAGCTCCAATGTCTAAGTGTGTTCTTGATCCCACTTTGTCAGGTACTTACCATTTCCTTGGGAAATGGACTCTTGAAGAAAATCTTAGTTTATCTGAAATTTCCCTTGGAACAAATCTTTGGGACTTTTTTAGCAAAAACCCTTCATATTTGAGTTTCTTCAATGAGTCAATGGCTAGTGACTCTCAAATGGTGAAGTTGGCATTGAAAGATCATAGTGCTGTCTTTGAAGGGTTGGAATCCATTGTAGATGTTGGTGGTGGAAATGGAACCGTATCTAAGATTATCAATGACATGTTTCCCAAATTGAATTGCATAGTGTTTGACCTTCCACATGTTGTGGAGAATTTTACAGGAAGCAACAATTTGAGCTTTGTTGGTGGAGACATGTTTCTTTCTATTCCTCATGCTCATGCTATTCTACTTAAGTGGATTTTACATGATTGGGATGATGAACATTGTGTAAAAATATTAAAAAAATGTAAAGATGCAATTTTAAATGATGTTAAAGGAGGAAAAGTAATTATCATAGATACTGTGATAAATGAAAACCATGAAGAGCATGAACTTACTCAATTGAAGCTAAGGATGGATATTATGATGACACATGTGAATGGAAAGGAGAGAAGCCAAGAAGAATTGAAGAAACTATTTTTGAAAGCAGGTTTTCAAAATTATAAAATATCCCCTTTAACTGGAATATATTCTCTTATTGAGGTCTATCCTTAA 1074 0.3724 MELLSECKASEIFEGQVVVYKHLYAYLDSMCLKWCLDLNMPDIIHNHGQPITLHHLASTLQVPPSKIDGVRRFMRHLAHNGFFHITRLLHDDNEEKEAYALTIASKLLVKGTQHSLAPMSKCVLDPTLSGTYHFLGKWTLEENLSLSEISLGTNLWDFFSKNPSYLSFFNESMASDSQMVKLALKDHSAVFEGLESIVDVGGGNGTVSKIINDMFPKLNCIVFDLPHVVENFTGSNNLSFVGGDMFLSIPHAHAILLKWILHDWDDEHCVKILKKCKDAILNDVKGGKVIIIDTVINENHEEHELTQLKLRMDIMMTHVNGKERSQEELKKLFLKAGFQNYKISPLTGIYSLIEVYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03495 357 Pfam O-methyltransferase domain 148 339 IPR001077 GO:0008171
Aip04g03495 357 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Aip04g03495 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Aip04g03495 357 Gene3D - 4 108 IPR036388 -
Aip04g03495 357 Gene3D Vaccinia Virus protein VP39 109 357 IPR029063 -
Aip04g03495 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Aip04g03495 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Aip04g03495 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Aip04g03495 357 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 6 356 - -
Aip04g03495 357 PANTHER O-METHYLTRANSFERASE 6 356 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03495 Aip-Chr4 129384197 129386050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03495 30 343 Monolignol Biosynthesis Gene Families AT5G54160 32.915 5.60e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03495 K22588 K13262 ag:AAC49926 449.129