Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03461 ATGGTGAACCTAACCCATGATAGAGCAACTGCACAAACAGCTGAGGTGTTATGTTCTCCAGCCTATTGTTCTGGTCAGTGGCTGTTGCTTCAAGATATGGGAATCAAGTTGAATTCAAGATCTGAGTGTGCAATGAGGCTTGTCATAATAATACCTCTCTGTGTTATTGTTCTGTTCTCTTATGCAGCTGCATATGATCCTTTGGATCCAAATGGAAACATAACAATCAAATGGGATGTTATGTCTTGGACACCAGACGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTTCCGGCACATCCCGAATCCGGGATGGACCCTGGGATGGTCATGGGCAAAGAAAGAGGTTATATGGACCATGGTAGGAGCTCAAACCACAGAGCAAGGAGATTGTTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCAACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAATCAGCAATACTCAAACTGCTGCAAGGGTGGAGTGGTTTCAGCATGGGGCCAAGATCCTTCGAGCGCTGTCTCCGCCTTCCAAGTCAGTGTTGGACAAGCTGGCACCTCCAACAAGACAGTTAAACTCCCCAAGAACTTCACTCTCTTGGCTCCAGGACCTGGCTATACCTGTGGCCCTGCCAAGGTTGTTCCCTCCACTGTTTTCCTTACACAAGATAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACCTGCACATACTCGCAATTTCTGGCTAGAAAGAACCCGAGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAAACCATTACTCCTTGTCCTACTTGTGCCTGTGGTTGCCAAAACAAGAAGAATTGTGTCAAGAGTGACTCGAAATTCCTCAACACACCCGGCGCTCACACTCCGAAGAGAGACAATGATCCATTGCTGCAGTGCACTCATCATATGTGTCCAATCAGGGTACACTGGCATGTGAAGCTCAACTACAAGGACTACTGGCGAGTCAAGATCGCCATAACGAACTTCAACTATAGAATGAACTACACCCTCTGGACTCTCGCCGTCCAGCATCCGAATCTCAACAATATCACCCAAGTTTTCAGTTTTGATTACAGGCCAATTCTTCCCTATGTGTCCATCAATGATACTGGTATGTTCTATGGCATGAAATTCTATAATGATCTATTAATGGAAGCTGGACCAAGCGGGAATGTTCAATCCGAAGTGCTTCTTCGAAAGGATCAGGATACCTTCACGTTCAAGCAAGGATGGGCGTTTCCTCGCAAGGTTTACTTCAATGGTGAAGAATGCATGCTTCCACCACCAGATACCTACCCATTCCTCCCCAATGCTGCCCCTGAGAAGAAAAAAAGAAAACGTAGTAGCAAACTCTAG 1404 0.4587 MVNLTHDRATAQTAEVLCSPAYCSGQWLLLQDMGIKLNSRSECAMRLVIIIPLCVIVLFSYAAAYDPLDPNGNITIKWDVMSWTPDGYVAVVTMSNFQMFRHIPNPGWTLGWSWAKKEVIWTMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQYSNCCKGGVVSAWGQDPSSAVSAFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTQDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPTCACGCQNKKNCVKSDSKFLNTPGAHTPKRDNDPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRMNYTLWTLAVQHPNLNNITQVFSFDYRPILPYVSINDTGMFYGMKFYNDLLMEAGPSGNVQSEVLLRKDQDTFTFKQGWAFPRKVYFNGEECMLPPPDTYPFLPNAAPEKKKRKRSSKL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03461 467 PANTHER COBRA-LIKE PROTEIN 48 456 - -
Aip04g03461 467 PANTHER PROTEIN COBRA 48 456 IPR006918 GO:0010215|GO:0031225
Aip04g03461 467 PIRSF COBRA 37 467 IPR006918 GO:0010215|GO:0031225
Aip04g03461 467 Pfam COBRA-like protein 88 251 IPR006918 GO:0010215|GO:0031225
Aip04g03461 467 MobiDBLite consensus disorder prediction 448 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03461 Aip-Chr4 129027707 129030404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03461 64 457 COBRA Gene Family AT3G29810 68.528 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03461 - - gmx:100783410 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03461 04 129027707 129030404 Aip10g03154 10 129094743 129097422 PCT