Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03459 ATGATGATGCGGTTCTCTTTGATAGAGCACAAAGCACTTCATACTTGCTATTGCTTTGTGTTCTTATTCCTACTTTCCTTCTCTTCATCAGAAGCTTATGATGCACTTGACCCAAATGGAAATATCACAATCAAATGGGATGTTATTAGATGGACACCTGATGGTTATGTTGCTGTTGTTACAATAAACAACTTCCAACAATATCGCCATATCTCTGCACCTGGCTGGTCATTAACATGGGCATGGCGGGCCGGCAAAGAGGTTATATGGAACATCAAGGGAGCCATGACCACTGAACAAGGAAACTGTTCAAGGTTATTTAAGGGAATAAGCCTCCCACATTCTTGTAAAAAGAATCCAACAGTTGTGGATTTACTTCCCAACACACCTTACAACCAAAAAGTTCCAAATTGTTGCAAAGGTGGAGTGCTTACTTCATGGACTCAGGATCCAACCAATTCGGTTGCATCATTTCAACTCACTGTTGGTCATGCTGGAACCACCAACCGAACCGTCCAAGTACCAAGGAACTTCACCTTCTATGCACCCGGTTTGGGTTATACTTGCGGCCCGGCCAAGATTGTTAGACCAACGATGTTTATTTCACCAGACAAAAGGAGAGTCACCCAAGCAATAATGACATGGAATGTGACATGCACGTATTCACATTTTCTAGCTCAAGAATCTACTCCCACTTGCTGTGTCTCCCTCTCAACGTTTTATAATGATACTACAGTGCCTTGCCCAACATGTTCATGTGCCTGCAAGCACAGCAACTCAACCTGTGTCAAAACAGATACCGGAAAGAATCCTTCAGTTGAATGTAGTAATCATATGTGTCCAATCAGTGTCCACTGGCACCTTAATCTTAATAACAAGAACTACTGGCGTGTGAATGTTACTATTTCCAATCTCAATTATAGGATGAATTATTCAGATTGGAACATGGTTATTCAACACCCTAATTTCAACAATAATCTCACTCAAGTTTTCGGATTAAAGTACAAGTTATTTACTCCTCTAGATGGTATTCATCTGGCTATGGTTTGGGGAATTAAGTTCTACAATAATGTTCTCATTGAAGCTGGTAATGTAGAATTTGAGGTACTATTTAGAAAGGATAATAACTCAAGTTTGAGTTTGAAGAAAGATTGGGGTTTCCCTCTAAGGATCTATTTTAATGGTGACCAGTGTGTAATGCCACCACCTGATGCTTATCCATGGTTGCCTAATTATGCTTGA 1242 0.4034 MMMRFSLIEHKALHTCYCFVFLFLLSFSSSEAYDALDPNGNITIKWDVIRWTPDGYVAVVTINNFQQYRHISAPGWSLTWAWRAGKEVIWNIKGAMTTEQGNCSRLFKGISLPHSCKKNPTVVDLLPNTPYNQKVPNCCKGGVLTSWTQDPTNSVASFQLTVGHAGTTNRTVQVPRNFTFYAPGLGYTCGPAKIVRPTMFISPDKRRVTQAIMTWNVTCTYSHFLAQESTPTCCVSLSTFYNDTTVPCPTCSCACKHSNSTCVKTDTGKNPSVECSNHMCPISVHWHLNLNNKNYWRVNVTISNLNYRMNYSDWNMVIQHPNFNNNLTQVFGLKYKLFTPLDGIHLAMVWGIKFYNNVLIEAGNVEFEVLFRKDNNSSLSLKKDWGFPLRIYFNGDQCVMPPPDAYPWLPNYA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03459 413 PIRSF COBRA 4 413 IPR006918 GO:0010215|GO:0031225
Aip04g03459 413 PANTHER PROTEIN COBRA 15 412 IPR006918 GO:0010215|GO:0031225
Aip04g03459 413 PANTHER COBRA-LIKE PROTEIN 15 412 - -
Aip04g03459 413 Pfam COBRA-like protein 56 222 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03459 Aip-Chr4 129018278 129021633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03459 3 411 COBRA Gene Family AT3G02210 59.954 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03459 - - gmx:100783820 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03459 04 129018278 129021633 Aip04g03459 04 129018278 129021633 ECH
Aip10g03153 10 129091463 129094489 Aip04g03459 04 129018278 129021633 PCT