Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03458 ATGGCTCAATCATTTGGTCAAACTGAAATCAACTGGGACAAGCTAGATAAAACTAAGTTCTATGTCATAGGAGCTGGCCTCTTTACCGGTGTTACGGTAGCACTCTACCCGGTTTCTGTTGTCAAAACAAGGCTGCAGGTTGCTACAAGGAATACTGTAGAGAGAAGTGCTTTCTCTGTTGCAAAAGGATTGATCAAAACCAATGGCATCCCTGGTTTGTATAGAGGGTTTGGCACGGTTATCACTGGTGCAATCCCTGCCAGGATCATATTCCTAACTGCTCTGGAAACCACAAAGTCGGCTTCCTTCAGAATGCTCGAACCGTTGAAGCTATCTGAAACTACCCAGGCTGCCATAGCAAATGGAATTGCAGGCATGACATCGTCACTTGTAGCCCAATCTGTATTTGTTCCCATGGACGTGGTTTGCCAAAAGTTGATGGTGCAAGGATACGCAGGCCATTCCCAGTATAGCGGGGGTTTGGATGTTGTTCGTAAGGTTTTAAAGACCGATGGTATCCGAGGATTATATCGAGGTTTTGGTCTATCTGCTATTACTTATTCTCCTTCAAGTGCTGTATGGTGGGCAAGTTATGGTACAAGCCAACGCCTAATGTGGAAATTCTTGGGACATGATAGCCCATCCGACGAAAACCCGCCTAGCGTGCAAAAGATTATGTTAGTTCAGGGTACTGGAGGGATGATTGCTGGTGCCACTGCATCCTGCATTACAACCCCATTGGATACTATCAAGACACGATTACAGGTGATGGGACATGAACATAGAAGCTCGATAAAACAAGTCGCGAAAGATTTAATCAACGAAGATGGTTGGAAAGGCTTTTATAGAGGGTTTGGTCCGAGATTATTTAGCATGTCGATGTGGGGTACTTCGATGATATTGACATACGAGTACCTAAAGCGTGTGTGTACTAAAGATGAATAA 945 0.4455 MAQSFGQTEINWDKLDKTKFYVIGAGLFTGVTVALYPVSVVKTRLQVATRNTVERSAFSVAKGLIKTNGIPGLYRGFGTVITGAIPARIIFLTALETTKSASFRMLEPLKLSETTQAAIANGIAGMTSSLVAQSVFVPMDVVCQKLMVQGYAGHSQYSGGLDVVRKVLKTDGIRGLYRGFGLSAITYSPSSAVWWASYGTSQRLMWKFLGHDSPSDENPPSVQKIMLVQGTGGMIAGATASCITTPLDTIKTRLQVMGHEHRSSIKQVAKDLINEDGWKGFYRGFGPRLFSMSMWGTSMILTYEYLKRVCTKDE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03458 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Aip04g03458 314 Gene3D Mitochondrial carrier domain 20 314 IPR023395 -
Aip04g03458 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Aip04g03458 314 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 314 - -
Aip04g03458 314 SUPERFAMILY Mitochondrial carrier 13 306 IPR023395 -
Aip04g03458 314 Pfam Mitochondrial carrier protein 230 313 IPR018108 -
Aip04g03458 314 Pfam Mitochondrial carrier protein 118 207 IPR018108 -
Aip04g03458 314 Pfam Mitochondrial carrier protein 26 101 IPR018108 -
Aip04g03458 314 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 314 - -
Aip04g03458 314 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Aip04g03458 314 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Aip04g03458 314 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Aip04g03458 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 309 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03458 Aip-Chr4 129012580 129016276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03458 10 314 Chloroplast and Mitochondria Gene Families AT5G15640 72.313 1.35e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03458 K15121 - gmx:100782750 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03458 04 129012580 129016276 Aip04g03458 04 129012580 129016276 ECH