Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03454 ATGTACCCTTTTGTTCCTGAGTTACCTCAAACAATTGCCTTACAAGATGGCACCTTGTTGATCCCTCCAATGGCAATTCAAGTCACTGTTTTTCCCAATTCTGGCTTCACCATTTGCATCAACTTCAGCCATGTGGTCACCGATGGAAAAGCCTTCCACAGTTTCATCAAGTTCTGGAGCTCACTTTGTAGGTCTAAAGAGAATAATCTTGTTGCTCTGCCATTGCATGATAGAGACATCATTCAAGACCCAAATGAGCTTAACCCCATTTTCTTAGAATCAGTGTGGAATTCTCCAAGAGAATTCATCATGAACCCTATCTATAATGTCCCTAATGACAGGGTTCGCCACAGGTTTGTGTTGAAGCGTGAACAAGTGGAGATTTTGAAGAGATTGGTTTATACTAAATACCAAAGCCTATTACATGTATCAACATTTGTTGTGACATGTGCTTTGATTTGGGTTTGTAAGGTAAAATCATCAGAAGATGATATAAAAAGTAGTGGTAATGATGAAGAATTATACCTAAGCTTTTGGGTAGATTGTCGTTACCTTGCTGAATTGAAAATTCCCTTAACATATTTTGGGAATTGCTTGGTTAATGGCATTGTAGGAATTAAGAGAAGCAAGCTAGTGGGGCAAAATGGTATTTTTGAAGCAGCTGCTGCACTTAGAAGCAAGATTAAAGAATTGCAATCTGGTCCTTATGAACGTGCTGAAACATTGATGTCAATTTTTAGTAAATTTGCAACAATGGGGCATCGTATGACGGGAATTGCAGGTTCACCAAAGTTGGATGCATATGAAAGTGATTTTGGGTGGGGAAAACCCAAATTGAGTGAAGTACTTCATGTAAATTCTCCAGAGTTGGTGTCTCTTTCTGATTGTAGGGACAAAGAAGGTGGAATTGAAGTTGGTGTAGCATTCGGGAGGGCTCAAATGCAAAAATTCAACACTATTTTGGAAGAGATCCTTGCTAATATTGCACTTCATGATCATGAAAAGGTTCAAGTTTTCGGCTAG 1023 0.3891 MYPFVPELPQTIALQDGTLLIPPMAIQVTVFPNSGFTICINFSHVVTDGKAFHSFIKFWSSLCRSKENNLVALPLHDRDIIQDPNELNPIFLESVWNSPREFIMNPIYNVPNDRVRHRFVLKREQVEILKRLVYTKYQSLLHVSTFVVTCALIWVCKVKSSEDDIKSSGNDEELYLSFWVDCRYLAELKIPLTYFGNCLVNGIVGIKRSKLVGQNGIFEAAAALRSKIKELQSGPYERAETLMSIFSKFATMGHRMTGIAGSPKLDAYESDFGWGKPKLSEVLHVNSPELVSLSDCRDKEGGIEVGVAFGRAQMQKFNTILEEILANIALHDHEKVQVFG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03454 340 Gene3D - 110 327 IPR023213 -
Aip04g03454 340 Gene3D - 1 107 IPR023213 -
Aip04g03454 340 PANTHER - 2 330 - -
Aip04g03454 340 Pfam Transferase family 12 321 - -
Aip04g03454 340 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 2 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03454 Aip-Chr4 129001390 129006883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03454 4 324 Monolignol Biosynthesis Gene Families AT5G48930 22.156 1.88e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03454 - - gmx:100782335 361.303