Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03453 ATGGCTAATAAAAGAGTGAAGGTGATAGAGCAGTGTCATATTGGTCCTCCACCAGGTTCGGTTTCTTCAACTTCTATTCCCCTTACATTCTTTGATATTCCATGGCTTTGTTGCCCTCCAATCAAACGCGTTTTCTTCTATGAATTCCATTATCCCAAAACACACTTCTTACAACAAGTGATTCCAAATCTCAAACAATCACTTTCACTCACTCTCAAACACTTCTTCCCTTTCTCTTCCAACATAGTTTTCCCTCCAAAGCCACAAACTCCACACATTCTCTACAAAGAAGGTGACACTCTTCCCTTCATAGTTGCTGAGTCCACAACAACAAATCTCAACAACCTCGTATCTGACTCACCAAGAGATGTCACGTGCTTGCACCCTTTTGTTCCTGTTTTGCCCTCACCACGTGCCTTGGAAGAAGATGAAAGTGGAACCTTGTTGATTTCTCCTATGGCCATTCAGGTAACTATCTTCCCCAACTCCGGCTTAGCCATATGCATTACTTTCAGACACGTGGTTGCTGATGGGAGAGCGTTTCATCACTTCATGAAGTTTTGGGCCTCGCTTTGTGGGCCTAAAGTGGGCCTTGATTTACCATTGCTTGATAGGAACATGATCCAAGACCCAAATGGGCTCAGGCCCATTTTCCTAGAAGCTATTTGGAATATCCCGATTAAAACCATGGAATCCACAGGCCAAGTTAATAATGTTCCTAGTGACATGGTGAGGCGCACGTTTGTGGTGAGGAATGAGCATGTTGAGAATTTGAAGAAATATGTGACTACTAAATGCCAAAACCATGGTCTAGAGACATTGCATGTTTCGACATTTGTGGTGACATGTTCTTTGATTTGGGTTTGTAAGGTGAAATCAGAAGATAATACCAAAGATGATGATGAATTACACATCTTGGCAATTATGGCAGATTCTCGTAACCTTCCTCAATTTTCAATTCCATTAACATACTTTGGTAATTGTGTGGTTTGTGGCAATGCAGAAATTACTGAGAGCAAATTAGTGGGGCAAAATGGTATTTTTGAAGCTGCCATTGCTATTGGAAGCAAAATTAGATGCTTGCAATATGAAGGTTATAAAGGAGCTGAAACATTAATGTCAAATTTTACTGAGTTTGCTACATTGGGGAAGCATATGTTATTAACTGCTGGTTCACCAAAGTTGGATGTGTATGAAACTGATTTTGGGTGGGGAAAGCCTAAGATGAGTGAAGTAGTTCAAGTAGAGTCTTCAATGTCAATTTCACTCTCTGATTGCAAGGGCAAAGGTGGAATTGAAGTTGGGATAGCACTTGGAAGGACTCAAATGATGAAATTCAATAGCCTTATGGAACAGTTCCTTGAAGAAATTGCAGTTCATGATTCATGA 1389 0.406 MANKRVKVIEQCHIGPPPGSVSSTSIPLTFFDIPWLCCPPIKRVFFYEFHYPKTHFLQQVIPNLKQSLSLTLKHFFPFSSNIVFPPKPQTPHILYKEGDTLPFIVAESTTTNLNNLVSDSPRDVTCLHPFVPVLPSPRALEEDESGTLLISPMAIQVTIFPNSGLAICITFRHVVADGRAFHHFMKFWASLCGPKVGLDLPLLDRNMIQDPNGLRPIFLEAIWNIPIKTMESTGQVNNVPSDMVRRTFVVRNEHVENLKKYVTTKCQNHGLETLHVSTFVVTCSLIWVCKVKSEDNTKDDDELHILAIMADSRNLPQFSIPLTYFGNCVVCGNAEITESKLVGQNGIFEAAIAIGSKIRCLQYEGYKGAETLMSNFTEFATLGKHMLLTAGSPKLDVYETDFGWGKPKMSEVVQVESSMSISLSDCKGKGGIEVGIALGRTQMMKFNSLMEQFLEEIAVHDS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03453 462 PANTHER - 4 459 - -
Aip04g03453 462 Pfam Transferase family 6 452 - -
Aip04g03453 462 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 4 459 - -
Aip04g03453 462 Gene3D - 5 234 IPR023213 -
Aip04g03453 462 Gene3D - 239 456 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03453 Aip-Chr4 128997906 128999330 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03453 44 457 Monolignol Biosynthesis Gene Families AT5G48930 23.832 1.04e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03453 - - gmx:100782335 598.201