Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03451 ATGTTTCTCAAATGTTTACGCTTTGGTGATTCAAAGAAGGGGGGAAAATATCCAATAGTAATAGAAGAGCAATGCCATCATTTTTCGTTTCAAGCTCTTAGAAAGGCAACCAACGGCTTTGACAAGAATCTTCAAATTGGAGAAGGAGGCTTTGGTAAGTTTTACAAAGGTTGTCTCAAACATAATAATGGTGATGCAAGTGATCATACGATCGCATTGAAGGTGATGCCTATTTGGTATTATGAGTTCAAGAAGGAAATTGAGATGCTATGTGAGCTTCGTCACACAAATATAATCTCCGTTATAGGCTTCTGCTACCAAAAAAAGAAACGTATTGTTGTATATGAGTACCTGGCGAATGGATCACTCCATGATTACTTGAATAATAAGAACAAAGAACCACTGTCATGGAAGAAGAGACTAGAGATCTGCATCGGAGTAGCACGTGCTCTACACTACCTTCACGTTGGAGCCAAGCGTTGTTGTATCATTCATCGTGACATAAAGCCTCATAACATTCTATTGGATGGGAATATGGTTCCCAAAATCTCGGGTTTTGAGTTATCATTGTACGGAGCGCTCTCTGCATCAAAGGAAAAGAAAATTGAAGTAGATTGCGTTGCAGGCACAGTTGGATACATTGCTCCTGAACACATCCGGCATGGTTATGTCACTGATAAAAGTGATGTTTTCTCCTTTGGTATGGTTCTGCAATTCGTGATGGGCCACGGTGTTTCGCGCTTCAAACATGATGCCGACACTCTTGAGGAGACAATAGATCCAAATCTGAATGGGAAGATTGCACCAGAATGTTGGCAGGTATTCACTAGTGTCATACAGAGTTGCTTGCAGCACGAAGCAGATGAGCGACCTACAATGGGCCAAGTTGAGATACTGCTTGAGAATGCTCTCTCATTGCAGGAACAAGCTGATATTACAAACACCAATGCTGCTCCCTATACTTTATTATCCACTACTTGTTTGTCCGATATATTTTCAGGTTGTATAAGTAATGGTGATCTGACCTTTGATGCTTCAATGGAGGAAGGCTCTTTCTCGGAAGTAAGTAGTGACTAA 1077 0.4095 MFLKCLRFGDSKKGGKYPIVIEEQCHHFSFQALRKATNGFDKNLQIGEGGFGKFYKGCLKHNNGDASDHTIALKVMPIWYYEFKKEIEMLCELRHTNIISVIGFCYQKKKRIVVYEYLANGSLHDYLNNKNKEPLSWKKRLEICIGVARALHYLHVGAKRCCIIHRDIKPHNILLDGNMVPKISGFELSLYGALSASKEKKIEVDCVAGTVGYIAPEHIRHGYVTDKSDVFSFGMVLQFVMGHGVSRFKHDADTLEETIDPNLNGKIAPECWQVFTSVIQSCLQHEADERPTMGQVEILLENALSLQEQADITNTNAAPYTLLSTTCLSDIFSGCISNGDLTFDASMEEGSFSEVSSD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03451 358 ProSiteProfiles Protein kinase domain profile. 40 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03451 358 SUPERFAMILY Protein kinase-like (PK-like) 19 296 IPR011009 -
Aip04g03451 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Aip04g03451 358 SMART serkin_6 40 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03451 358 PANTHER OS07G0166700 PROTEIN 11 323 IPR045272 GO:0004714|GO:0006468
Aip04g03451 358 Gene3D Transferase(Phosphotransferase) domain 1 118 323 - -
Aip04g03451 358 PANTHER TYROSINE KINASE FAMILY PROTEIN 11 323 - -
Aip04g03451 358 Gene3D Phosphorylase Kinase; domain 1 10 117 - -
Aip04g03451 358 Pfam Protein tyrosine and serine/threonine kinase 44 296 IPR001245 GO:0004672|GO:0006468
Aip04g03451 358 PRINTS Tyrosine kinase catalytic domain signature 115 128 IPR001245 GO:0004672|GO:0006468
Aip04g03451 358 PRINTS Tyrosine kinase catalytic domain signature 157 175 IPR001245 GO:0004672|GO:0006468
Aip04g03451 358 PRINTS Tyrosine kinase catalytic domain signature 228 250 IPR001245 GO:0004672|GO:0006468
Aip04g03451 358 PRINTS Tyrosine kinase catalytic domain signature 271 293 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03451 Aip-Chr4 128987349 128988624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03451 25 311 Receptor kinase-like Gene Family AT3G51550 40.065 4.01e-64 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03451 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03451 - - adu:107486591 681.789