Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03450 ATGGAGAAGAAGGTGAAGCATGATGACAGAGTGAAGGTGATAGAGCAGTGTCAAGTAGGTCCTCCACCAGGTTCTGTTCGTCCAACCTCTGTTCCCCTTACTTTCTTTGATGTTCCTTTTTTATGCTTGCCTGTAACATGCAAACGCATTTTCTTCTATGAATTCCCTTACTCCACAACACACTTCTTACAAGAAGTGATTCCAAATCTGAAACAATCACTTTCACACTCTCTCAAACACTTCTTTCCTTTCTCTTCCAACATAGTTTTCCCTCAAAAGCCACAAACCCCTCACATTCTCTACTCAGAAGGTGACACTCTCACTTTCATAGTTGCTGAGTCCACGACAGCAAATCTTGACAGCCTCGTATCTGACACACCGAGAGATGTCACGTGCTTGCACCCCTTTGTTCCTATGTTGCCTTCTCCACGTGCCCTAGAGGATGGCACCTTGTTGATACCTCCTATGGCTATTCAAGTCACTATCTTCCCCAACTCTGGCTTCACTATATGCATCAATTTCAGTCACGTGGTGGTGGATGGGAAGGGATTCCATCACTTCATGAAGTTTTGGGCATCAGTTTGTGGGTCTAAAGAGAACATTGTTACTTTGCCAATCCATGATAGAGATACGATTAAAGATCCAAATGGACTTAAGCATATATTCTTAGAAACAGTGTGGAATTCTACAAGAGAAAGGTTCATGAGTCTTGGCCACAATGTTCCTAGTGACAATGTTCGCCGCACGTTTGTGCTGAGGCGTGACCATGTTGATCATTTGAAGAAATACGTGTCTACTAAGTGCCAAAGCCATGGTCTAGGAACGTTACATTTGTCAACATTTGTTGTGACATGTTCTTTGATTTGGGTTTGTAAGGTAAAATCCCAAGATATTGTAAGTAATGATGATGAAGAATTATACATATGTCCTTGGTTAGATTGCCGTAACGTTGGTGAGTTGGAAATTCCCTCAACGTACTTTGGAAATTGTTTGGTTAATGGCATTGTTGCAATCAAGAGGAGCAAGCTAGTGGGGCAAAATGGTATTTTTGAAGCAGCTGTTGCTATTGGGAGCAAAGTTAGAGAATTGCAATCTGAACCTTATAAATGTGCCGAAACATTTATGTCAATTTTTAGTAAATGGTCGCATCGTATGTTGGGAATTGCAGGTTCGCCAAAGTTGGATGTGTACGAGACTGATTTTGGATGGGGAAAACCCAAATTGAGTGAAGTAGTTCAACTAGATCCTCAGTTGGTGTCCCTCTCTGATTGTAGGGACAAAGAAGATGGAATAATTGAAGTTGGTGTAGCACTTGGGAGGACTCAAATCCATAAATTCAACACCATTTTAGAAGAGCTTCTTGCAATCATTGTAGTTT 1378 0.4136 MEKKVKHDDRVKVIEQCQVGPPPGSVRPTSVPLTFFDVPFLCLPVTCKRIFFYEFPYSTTHFLQEVIPNLKQSLSHSLKHFFPFSSNIVFPQKPQTPHILYSEGDTLTFIVAESTTANLDSLVSDTPRDVTCLHPFVPMLPSPRALEDGTLLIPPMAIQVTIFPNSGFTICINFSHVVVDGKGFHHFMKFWASVCGSKENIVTLPIHDRDTIKDPNGLKHIFLETVWNSTRERFMSLGHNVPSDNVRRTFVLRRDHVDHLKKYVSTKCQSHGLGTLHLSTFVVTCSLIWVCKVKSQDIVSNDDEELYICPWLDCRNVGELEIPSTYFGNCLVNGIVAIKRSKLVGQNGIFEAAVAIGSKVRELQSEPYKCAETFMSIFSKWSHRMLGIAGSPKLDVYETDFGWGKPKLSEVVQLDPQLVSLSDCRDKEDGIIEVGVALGRTQIHKFNTILEELLAIIVV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03450 459 Gene3D - 10 237 IPR023213 -
Aip04g03450 459 PANTHER - 9 458 - -
Aip04g03450 459 Gene3D - 241 457 IPR023213 -
Aip04g03450 459 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 9 458 - -
Aip04g03450 459 Pfam Transferase family 30 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03450 Aip-Chr4 128978821 128980625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03450 50 453 Monolignol Biosynthesis Gene Families AT5G48930 21.429 9.91e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03450 - - ahf:112729058 543.888