Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03449 ATGGTCCTCAAATGTTTATGCTTTGGTGATTCAAAGGAGGAGAAAAACTATCCGACAGTAATAGAAGAGCTATGCCATCGATTTTCCTTTGAAGATCTTAGAAAATCAACCAACAACTTTGACGATAAACTAGTAATTGGGTGGTCACTCTTTGGTGATAAGGTATACAAAGGTTGTCTCAAACATAATGATGCTGCAACTGAGCATACCATTACATTGAAGGTGATGGTGCCTCATTACTCCATCCAAGGTTCACTTGAATTCAAGAAGGAAATTGAGGTGCTATGTCAGCTTCGTCACCCTAATATAATCTCTCTAATAGGCTTCTGCGACCAAGAAAAGGAAAAGATAGTTGTGTATGAGTACATGGCCAATGGATCACTTGGTGATTACTTGGGAGATGGGATTAGGAATAACCAACCACTTTCATGGAAGAAAAGACTAGAGATCTGCATCGGAGTAGCCCGGGCTCTACACTACCTTCACTCAGGAGCCAAGCGTGCTATCATTCATCGTGGTATAAATCCAAATAATATTCTTTTGGATAAGAATATGATGCCCAAACTTGCAAATTTTGGGATATCAGTGCAGGGAGCGCTCTCTACATTGAAGCCAAAGGAAATCAAAGTAGATATGATTGTAGGTACATGTAAATGGATGGCTCCGGAGTATGTCTGGAATGGTATTGTTACTGATAAATGTGATGTTTTCTCCTTTGGCATGGTTCTACTAGACGTGGTAGGCCATAATGAAGGGCAAACTCATGAGGAGACAATGGATCCAATTCTGAAAGGAAAGATTGCACCAGAATGTTGGCAGGTATTCACTAGTGTCATACAGAGATGCTTGCAGCACGAACCAGATGAGCGACCTACAATGGGCGAAGTTGAAATATTGCTTGAGAATGCTCTCTCATTGCAGGAACAAGCTGATATTACAAACACCAATGCTGCTCCCTATACTTTATTATCCACTAGTTGTTTGTCCGATATATTTTCAggtagaaattcaggtaga 1017 0.3982 MVLKCLCFGDSKEEKNYPTVIEELCHRFSFEDLRKSTNNFDDKLVIGWSLFGDKVYKGCLKHNDAATEHTITLKVMVPHYSIQGSLEFKKEIEVLCQLRHPNIISLIGFCDQEKEKIVVYEYMANGSLGDYLGDGIRNNQPLSWKKRLEICIGVARALHYLHSGAKRAIIHRGINPNNILLDKNMMPKLANFGISVQGALSTLKPKEIKVDMIVGTCKWMAPEYVWNGIVTDKCDVFSFGMVLLDVVGHNEGQTHEETMDPILKGKIAPECWQVFTSVIQRCLQHEPDERPTMGEVEILLENALSLQEQADITNTNAAPYTLLSTSCLSDIFSGRNSGR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03449 339 PANTHER TYROSINE KINASE FAMILY PROTEIN 14 323 - -
Aip04g03449 339 SUPERFAMILY Protein kinase-like (PK-like) 26 309 IPR011009 -
Aip04g03449 339 Gene3D Phosphorylase Kinase; domain 1 7 122 - -
Aip04g03449 339 ProSiteProfiles Protein kinase domain profile. 40 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03449 339 Pfam Protein tyrosine and serine/threonine kinase 46 296 IPR001245 GO:0004672|GO:0006468
Aip04g03449 339 Gene3D Transferase(Phosphotransferase) domain 1 123 323 - -
Aip04g03449 339 PANTHER OS07G0166700 PROTEIN 14 323 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03449 Aip-Chr4 128974037 128975053 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03449 10 338 Receptor kinase-like Gene Family AT5G39000 37.500 5.20e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip04g03449 PK_Tyr_Ser-Thr 9.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03449 - - ahf:112797914 632.869