Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03447 ATGGTCCTCAAATGTTTATGCTTTGGTGATTCAAAGAAGGAGAAAAATTATTCGACAGTAATAGAAGAGCTATGCCATCGATTTTCCTTTGAAGATCTTAGAAAATCAACCAACAACTTTGACGATAAACTAGTAATTGGGTGGTCACCCTTTGGTGATAAGGTATACAAAGGTTGTCTCAAACATAATGATGCTGCAACTGATCATACCATTACATTGAAGGTGATGGTGCCTCAATACCCCATCCAAGGTTCACTTGAATTCAAGAAGGAAATTGAGTATGAGTACATGGCCAATGGATCACTTGGTGATTACTTGAGAGATAGGAATAGGAATAACCAACCACTTTCATGGAAGAAAAGACTAGACATCTGCATTGGAGTAGCACGTGCTCTACACTACCTTCACTCAGGAGCCAAGCTTGCTATCATTCATCCTGATATAAATCCAAGTAATATTCTTTTGGATAAGAATATGATGCCCAAACTTACAAATTTTGGGATATCATTGCAGGGAGGGCTCTCTACATTGAAGCCAAAGCAAATCAAAGTAGATATGATTGTAGGTACATCTGCATTGATGGCTCCGGAGTATGCTATACACGAGCACAGTCTTGAGGAGACAATGGATCCAATTCTGAAAGGAAAGATTGCGCCAGAATGTTGGCAAGTATTCACTAGTGTCATACAAAGTTGCTTGGAGTACGAAGCAGATAAGCGACCAACAATGGGGGAAGTAGAGGTATTGCTTGAGCATGCTCTCTCATTGCAGCAACAAGCTGATATTATAAGGAATGTTGGTCGCTATACCTTATCATCCACTACCCCTTGTTATTGTCGAGAGCGATATAATGATCATGAATCACTACCCAGATAG 876 0.3995 MVLKCLCFGDSKKEKNYSTVIEELCHRFSFEDLRKSTNNFDDKLVIGWSPFGDKVYKGCLKHNDAATDHTITLKVMVPQYPIQGSLEFKKEIEYEYMANGSLGDYLRDRNRNNQPLSWKKRLDICIGVARALHYLHSGAKLAIIHPDINPSNILLDKNMMPKLTNFGISLQGGLSTLKPKQIKVDMIVGTSALMAPEYAIHEHSLEETMDPILKGKIAPECWQVFTSVIQSCLEYEADKRPTMGEVEVLLEHALSLQQQADIIRNVGRYTLSSTTPCYCRERYNDHESLPR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03447 291 Gene3D Phosphorylase Kinase; domain 1 9 98 - -
Aip04g03447 291 Pfam Protein kinase domain 94 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03447 291 SUPERFAMILY Protein kinase-like (PK-like) 26 260 IPR011009 -
Aip04g03447 291 Gene3D Transferase(Phosphotransferase) domain 1 99 201 - -
Aip04g03447 291 Gene3D Transferase(Phosphotransferase) domain 1 202 268 - -
Aip04g03447 291 PANTHER TYROSINE KINASE FAMILY PROTEIN 94 201 - -
Aip04g03447 291 PANTHER TYROSINE KINASE FAMILY PROTEIN 204 272 - -
Aip04g03447 291 PANTHER TYROSINE KINASE FAMILY PROTEIN 13 94 - -
Aip04g03447 291 ProSiteProfiles Protein kinase domain profile. 1 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03447 291 PANTHER OS07G0166700 PROTEIN 94 201 IPR045272 GO:0004714|GO:0006468
Aip04g03447 291 PANTHER OS07G0166700 PROTEIN 13 94 IPR045272 GO:0004714|GO:0006468
Aip04g03447 291 PANTHER OS07G0166700 PROTEIN 204 272 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03447 Aip-Chr4 128963900 128964871 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03447 18 261 Receptor kinase-like Gene Family AT3G51550 32.166 5.39e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aip04g03447 Pkinase 4.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03447 - - aip:107637356 600.512