Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03443 ATGGTTCTGAAATGTTTATGCTTTGGTGATTGGAAGAAGGGGAATGCAAGTTGTTCATCTAAGAAACAATATCCAACAGTAATAGAAGAGCTATGCCATCCCTTTTCCTTTCATGATCTTAGAAAGTCAACCAACAACTTTGACCAGAAACTAATAATTGGAGAAAGAGCCCTTACTAAGGTTTATAAAGGTTGTCTCAACCATAATAATAATAATAATGGTGCTGCTGCAACTGATTATACGGTGGCATTGAAGGTGATGACTGTTCCCCTTGAATTCAAGAAGGAAGTCGAGATGCTATGTCAGCTTCATCACCCAAATATAATATCTCTTATAGGCTTCTGCCACCATGGAAAGGAAAAGATTGCTGTGTACGAGTATACAGACAATGGATCACTCCATGATTACTTGAGTAACAAGGACAAAGAACCACTGTCGTGGAAGAAAAGACTAGACATCTGCATCGGAGTAGCACGTGCTCTACACTACCTTCACTCTGGAGTTAAGCGTGCAGTTTTTCATCGTGACATAAATCCAATTAATATTCTTTTGGATAGGAATATGATGCCCAAACTTGCCAATTTTGTGATATCATTGCAGGGAGGGCTCTCTACATTGAAGCCAAAGCAAATCAAAGTAGATAAGATTGTAGGTACATCTGCATTGATGGCTCCGGAGTATGCTATACACGGTATTGTTACTGATAAATGTGATGTTTACTCCTTTGGTTTGGTTCTACTACACATGGTAGGCCATAATGTGTTGAACTACTTAATTCAACATGAAGAGCACATTCTTGAGGAGACACTAGATCCAATTCTGAAAGGAAAGATTGCGCCAGAATGTTGGCAAGTATTCACTAGTGTCATACAAAGTTGCTTGGAGTACGAAGCAGATGAGCGACCAACAATGGGAGAAGTAGAGGTATTGCTTGAGCATGCTCTCTCGTTGCAGCAACAAGCTGATATTATAAGGAATGCTGCTCGCTATACCTTATCATCCACTACCCCTTGTTATTGTCGACAGCGATATAATAATCATGAATCACTACCCAGATAG 1059 0.3975 MVLKCLCFGDWKKGNASCSSKKQYPTVIEELCHPFSFHDLRKSTNNFDQKLIIGERALTKVYKGCLNHNNNNNGAAATDYTVALKVMTVPLEFKKEVEMLCQLHHPNIISLIGFCHHGKEKIAVYEYTDNGSLHDYLSNKDKEPLSWKKRLDICIGVARALHYLHSGVKRAVFHRDINPINILLDRNMMPKLANFVISLQGGLSTLKPKQIKVDKIVGTSALMAPEYAIHGIVTDKCDVYSFGLVLLHMVGHNVLNYLIQHEEHILEETLDPILKGKIAPECWQVFTSVIQSCLEYEADERPTMGEVEVLLEHALSLQQQADIIRNAARYTLSSTTPCYCRQRYNNHESLPR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03443 352 Gene3D Phosphorylase Kinase; domain 1 10 127 - -
Aip04g03443 352 ProSiteProfiles Protein kinase domain profile. 47 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03443 352 Gene3D Transferase(Phosphotransferase) domain 1 129 333 - -
Aip04g03443 352 SUPERFAMILY Protein kinase-like (PK-like) 22 307 IPR011009 -
Aip04g03443 352 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 333 - -
Aip04g03443 352 PANTHER OS07G0166700 PROTEIN 18 333 IPR045272 GO:0004714|GO:0006468
Aip04g03443 352 Pfam Protein tyrosine and serine/threonine kinase 52 308 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03443 Aip-Chr4 128912792 128914630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03443 14 322 Receptor kinase-like Gene Family AT3G51550 35.152 3.78e-58 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03443 PK_Tyr_Ser-Thr 5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03443 - - ahf:112797914 429.098