Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03442 ATGGTACCAAAACTCTCACATCTTGGATTTTCCTTACAAGGTCCACTATTAAGGTCAAAGGCAAAGCCTATAAAAGTGGACATGATGATCGGTACACCTGGTTTCATGGCACCTGAGTATGTCCTAACCAAAACCTTCACAGATAAATGTGATGTTTATTCCTTTGGGATAGTTTTAATGGTAGTTTTATCCACTAGCTACAAGCAGAGCTTCTTTGAGAAGATGTACATGATGGCCGACTCAGATTTGTTTTTAGAAGAGCCATTGTATTTAATGACTCCATATGTGGATATACCTAGCTTTTTGGAGAGGATTTCGGTTGATGAGATTATTGATCCAGTGTTATTGGGAAAGATTGCACCAGAATGTTTGGGAGTATTCATAGATATCACAAAAAGATGCTTAAGTAAAGATGCAAACGAAAGACCAGATATGGGTGAAGTACAAGTTGAACTTGAGCAAGCACTAGCACTACAAGAGGATGAAGATGCATGCCCGGAACCATGA 507 0.3905 MVPKLSHLGFSLQGPLLRSKAKPIKVDMMIGTPGFMAPEYVLTKTFTDKCDVYSFGIVLMVVLSTSYKQSFFEKMYMMADSDLFLEEPLYLMTPYVDIPSFLERISVDEIIDPVLLGKIAPECLGVFIDITKRCLSKDANERPDMGEVQVELEQALALQEDEDACPEP 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03442 168 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03442 168 Gene3D Transferase(Phosphotransferase) domain 1 1 165 - -
Aip04g03442 168 SUPERFAMILY Protein kinase-like (PK-like) 3 152 IPR011009 -
Aip04g03442 168 Pfam Protein kinase domain 22 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03442 168 PANTHER OS07G0166700 PROTEIN 1 164 IPR045272 GO:0004714|GO:0006468
Aip04g03442 168 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03442 Aip-Chr4 128911838 128912430 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03442 2 163 Receptor kinase-like Gene Family AT3G51550 34.568 8.02e-19 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03442 Pkinase 1.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03442 - - aip:107637353 323.168