Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03438 ATGCTTCTCAAGTGTATAAGCTTTCCTGTTTCAAAGAAGACAAGCTCATCCAAGAAGCACTCTCCAACGGTTATAGAATTGTTATGCCATCAATTTTCCCTGGAAGATCTTACAAGATCAACCAAAAACTTCAACCAGAAATTAATAGTTGGAAAAGGAGGTTTTAGCACTGTATACAAAGGATGTCTCAAACACAATGGTGGATCAGACCATACAATTGCATTAAAGCTCAAGTGTTGCAACTCCAACCAGCATTTCCTTGAGTTCATGAAGGAAATTGAGTTGCTATGCCAGCTTCATCATCCTAATTTGATCTCTCTTGTAGGATTTTGCAACCATGAAAAGAAAAAGATTATTGTGTATGAGTTCATGTGCAATGACTCTCTTCATGATCACCTATACAATAGGGACACTATCATGGCAGAAAAGGCTAGAGATATGTATAGGAGTCGCGCGGGGACTACACTACCTTCATGCTGGAGCCAAGCGCTCTATCTTTCATTGTGA 507 0.3945 MLLKCISFPVSKKTSSSKKHSPTVIELLCHQFSLEDLTRSTKNFNQKLIVGKGGFSTVYKGCLKHNGGSDHTIALKLKCCNSNQHFLEFMKEIELLCQLHHPNLISLVGFCNHEKKKIIVYEFMCNDSLHDHLYNRDTIMAEKARDMYRSRAGTTLPSCWSQALYLSL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03438 168 Pfam Protein tyrosine and serine/threonine kinase 49 136 IPR001245 GO:0004672|GO:0006468
Aip04g03438 168 ProSitePatterns Protein kinases ATP-binding region signature. 50 76 IPR017441 GO:0005524
Aip04g03438 168 ProSiteProfiles Protein kinase domain profile. 44 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03438 168 SUPERFAMILY Protein kinase-like (PK-like) 19 144 IPR011009 -
Aip04g03438 168 PANTHER TYROSINE KINASE FAMILY PROTEIN 15 140 - -
Aip04g03438 168 PANTHER OS07G0166700 PROTEIN 15 140 IPR045272 GO:0004714|GO:0006468
Aip04g03438 168 Gene3D Phosphorylase Kinase; domain 1 5 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03438 Aip-Chr4 128895711 128896217 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03438 15 137 Receptor kinase-like Gene Family AT5G38990 39.024 2.42e-25 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip04g03438 PK_Tyr_Ser-Thr 2.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03438 - - adu:107486597 276.944