Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip04g03437 | ATGGGTTTTCTATCTGGTTTTTCTTGCTGCTTCCGATCTTCTTCTGGTGATAGAGGAACACGTATCTTAGAAGAACAACCGTCATCCATTATAAGTGAACTCTGCCGTCAGTTTTCACTTTCAGAGATGCAATCAGCAACAAATAACTTCCATAATTCTTTGAAAGTTGGAGAAGGCTCCTTTGGCAATGTCTGCAAAGGTTATCTGGAAAACAGTTCTACACTAGTTGCCATCAAACGGTGCAAGAAGGATTCAGTTTTTGGTCTTTCCAGCTTGAAGAATGAGGTTGTCCTGCTTTCTCAGCTGCAACACCCCAATCTCATCTCCTTAGTTGGATTCTACATTGAAGGAACCGAGTTGGTTCTTGTATATGATTACATGTCTAATGGTTCCGTTCGTGATCATCTTCATCGTGGGAACATAGATCCACTTACATGGAAGAGGAGGCTTCAAATTTGCATAGGAGTGGCGCGTGCACTGCACTATCTTCACACAGGAGCCAAGTACACTATTATCCACCGGAACATTAAAACACGTCTCATTCTTTTGGATAGTAATTGGGAACTAAAAGTTTCAAGCCTATTATTATCCAAAAGGGGAGCACTTAGTACTTCAAAATCATTGACAAGGGTGGAGTCAGATGTGAAGGGAACAATGGGGTATGTTGATCGGGAATATGCAGCAACAAATATGTTGACTGAAAAATCAGATGTATTTTCATTCGGCATAGTTCTATTAGAAGTTGTGAGTGCAAAGCCGGCACACGAGATTATCAGAGAATACTTTCAAGGCTTTAATCAATCACTGAGGTCATCTGCAAATGAAATTGTTGATCTAATTCTTAAGTCTAAGATTGATCCAGATTGTTGGAAAACATTTGTTGACATCACTAAGAGATGTTTGCTTATGGAGGGAAGGGAAAGGCCAGACATGGGAGAAGTGGAGGTGGAACTTGAACATGCACTAAAATTGCAAGAGGAAGCTGTTGCCAAGAATTAA | 999 | 0.4044 | MGFLSGFSCCFRSSSGDRGTRILEEQPSSIISELCRQFSLSEMQSATNNFHNSLKVGEGSFGNVCKGYLENSSTLVAIKRCKKDSVFGLSSLKNEVVLLSQLQHPNLISLVGFYIEGTELVLVYDYMSNGSVRDHLHRGNIDPLTWKRRLQICIGVARALHYLHTGAKYTIIHRNIKTRLILLDSNWELKVSSLLLSKRGALSTSKSLTRVESDVKGTMGYVDREYAATNMLTEKSDVFSFGIVLLEVVSAKPAHEIIREYFQGFNQSLRSSANEIVDLILKSKIDPDCWKTFVDITKRCLLMEGRERPDMGEVEVELEHALKLQEEAVAKN | 332 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip04g03437 | 332 | Gene3D | Phosphorylase Kinase; domain 1 | 35 | 126 | - | - | |
Aip04g03437 | 332 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE FERONIA | 24 | 329 | - | - | |
Aip04g03437 | 332 | ProSiteProfiles | Protein kinase domain profile. | 50 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip04g03437 | 332 | PANTHER | OS07G0166700 PROTEIN | 24 | 329 | IPR045272 | GO:0004714|GO:0006468 | |
Aip04g03437 | 332 | PIRSF | ILK | 18 | 329 | - | - | |
Aip04g03437 | 332 | SUPERFAMILY | Protein kinase-like (PK-like) | 28 | 322 | IPR011009 | - | |
Aip04g03437 | 332 | ProSitePatterns | Protein kinases ATP-binding region signature. | 56 | 79 | IPR017441 | GO:0005524 | |
Aip04g03437 | 332 | Gene3D | Transferase(Phosphotransferase) domain 1 | 127 | 332 | - | - | |
Aip04g03437 | 332 | Pfam | Protein tyrosine and serine/threonine kinase | 54 | 316 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip04g03437 | Aip-Chr4 | 128893844 | 128894842 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip04g03437 | 14 | 328 | Receptor kinase-like Gene Family | AT3G51550 | 45.679 | 1.35e-85 | 274 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Aip04g03437 | PK_Tyr_Ser-Thr | 2.6e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip04g03437 | - | - | aip:107638149 | 519.235 |