Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03435 ATGCTTCTCAAGTGTATAAGCTTTCCTCTTCCAAAGAAGAAAAACTCATCCAAGAAGCACTCTTCAACGGTTATAGAATCGTTATGCCATCAATTTTCCCTGGAAGATCTTAAAAGATCAACCAACAACTTCAACCAGAAATTAATAGTTGGAAAAGGAGGTTTTAGCACTGTATACAAAGGATGTCTCAAACACAATGGTGGATCAGACCATACAATTGCATTAAAGCTCAAGTGTTGCAACTCCAACCAGCATTTCCTCGAGTTCATGAAGGAAATTGAGTTGCTATGCCAGCTTCATCATCCTAATTTGATCTCTCTTGTAGGATTTTGCAACCATGAAAAGAAAAAGATTATTGTGTATGAGTTCATGTGCAATGGCTCTCTTCATGATCACCTATACAATAGGGACAAGAAACCACTATCATGGCAGACAAGGCTAGAGATATGTATAGGAGTGGCGCGTGGACTACACTACCTTCACGCTGGAGCCAAGCGCTCTATCTTTCATTGTGACATAAAACCTAGTAACATTCTTTTGGATAGCAATATGGTGTCTAAGCTCTCAGACTTTGGGCTTTCATTGCAGGGACCACTATCTACTTCCAAGCCAAAACCAATTGAAGTAGATTATGTTGCAGATGTGAAGGGAACATTGGGGTATCTTGATCCGGAATATTACAACACAAGTATGTTGACTGAAAAATCAGATGTATTTTCATTCGGCATAGTTCTATTAGAAGTTGTGAGTGCAAAGCCGGCAAAAGAGATTAGCGGAGAATACTTTCAAGGCTTTAATCAGTCACTGAGGTCATTTGGAAATGAAATTGTTGATCCAATTCTTAAGTCTAAGATTGATCCAGATTGTTGGAAAACATTTGTTGACATCACTAAGAGATGTTTGCTTTTGGAGGGAAGGGAGAGGCCAGACATTGGAGAAGTGGAGGTGGAACTTGAACTTGCACTAAAATTGCAAGAGGAA 981 0.3935 MLLKCISFPLPKKKNSSKKHSSTVIESLCHQFSLEDLKRSTNNFNQKLIVGKGGFSTVYKGCLKHNGGSDHTIALKLKCCNSNQHFLEFMKEIELLCQLHHPNLISLVGFCNHEKKKIIVYEFMCNGSLHDHLYNRDKKPLSWQTRLEICIGVARGLHYLHAGAKRSIFHCDIKPSNILLDSNMVSKLSDFGLSLQGPLSTSKPKPIEVDYVADVKGTLGYLDPEYYNTSMLTEKSDVFSFGIVLLEVVSAKPAKEISGEYFQGFNQSLRSFGNEIVDPILKSKIDPDCWKTFVDITKRCLLLEGRERPDIGEVEVELELALKLQEE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03435 327 Gene3D Phosphorylase Kinase; domain 1 6 123 - -
Aip04g03435 327 PANTHER OS07G0166700 PROTEIN 15 327 IPR045272 GO:0004714|GO:0006468
Aip04g03435 327 ProSiteProfiles Protein kinase domain profile. 44 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03435 327 Pfam Protein tyrosine and serine/threonine kinase 49 315 IPR001245 GO:0004672|GO:0006468
Aip04g03435 327 ProSitePatterns Protein kinases ATP-binding region signature. 50 76 IPR017441 GO:0005524
Aip04g03435 327 Gene3D Transferase(Phosphotransferase) domain 1 124 327 - -
Aip04g03435 327 SUPERFAMILY Protein kinase-like (PK-like) 17 314 IPR011009 -
Aip04g03435 327 PANTHER TYROSINE KINASE FAMILY PROTEIN 15 327 - -
Aip04g03435 327 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Aip04g03435 327 SMART serkin_6 44 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03435 Aip-Chr4 128856496 128881404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03435 15 326 Receptor kinase-like Gene Family AT5G38990 46.106 5.15e-85 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03435 PK_Tyr_Ser-Thr 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03435 - - ahf:112743375 500.745