Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03434 ATGGGTTTTCTATCTGGTTTTTCTTGCTGCTTCCAATCTTCTTCTGTTGATAGAGGAACACGTATCTTAGAAGAACAACCATCATCCATTATAAGTGAACTCTGCCGTCAGTTTTCACTTTTAGAGATGCAATCAGCAACAAATAACTTCCATAATTCTTTTAAAGTTGGAGAAGGCTCATTTGGCAATGTCTACAAAGATTATCTGGAAAACAGTTCTACACCAGTTGCCATCAAACGGTGCAAGAAGGATTCAGTTTTTGGTCTTTCCAGCTTGAAGAATGAGGTTGTCCTGCTTTCTCAGCTGCAACACCCCAATCTCATCTCCTTAGTTGGATTCTGCATTGAAGGAACCGAGTTGGTTCTTGTATATGATTACATGTCTAATGGTTCCATTCGTGATCATCTTCATCGTGGGAACATAGATCCACTTACATGGAAGAGGAGGCTTCAAATTTGCATAGGAGTGGCGCGTGCACTGCACTATCTTCACACAGGAGCCAAGTACACTATTATCCACCGGAATATTAAAACACGTCTCATTCTTTTGGATAGTAATCGGGAACCAAAAGTTTCAAGCCTATTAATATCCAAAAGGGGAGCACTTAGTACTTCAAAGTCATTGACAAGGGTGGAGTCAGATGTGAAGGGAACAATTGGGTATCTTGATCCAGAATATTTAGCAACAACTATGTTGACTGAAAAATCAGATGTATTTTCATTCGGCATAGTTCTATTAGAAGTTGTGAGTGCAAAGCTGCCGCCCGAGATTAACAGAGAATACTTTCACTTTCAACGCTTTAGTCAGTCATTGAGGTCATCTGCAAATGAAATTGTTGATTCAATTCTTAAGTCTAAGATTGATCCAGATTGTTGGAAAACATTTGTTGACATCACTAAGAGATGTTTGCTTACGGAGGGAAGGGAGAGGCCAGACATGGGAGAAGTGGAGGTGGAACTTGAACATGCACTAAAATTTCAAGTGGAAGCTGATGCCAAGAGTTAA 1005 0.4 MGFLSGFSCCFQSSSVDRGTRILEEQPSSIISELCRQFSLLEMQSATNNFHNSFKVGEGSFGNVYKDYLENSSTPVAIKRCKKDSVFGLSSLKNEVVLLSQLQHPNLISLVGFCIEGTELVLVYDYMSNGSIRDHLHRGNIDPLTWKRRLQICIGVARALHYLHTGAKYTIIHRNIKTRLILLDSNREPKVSSLLISKRGALSTSKSLTRVESDVKGTIGYLDPEYLATTMLTEKSDVFSFGIVLLEVVSAKLPPEINREYFHFQRFSQSLRSSANEIVDSILKSKIDPDCWKTFVDITKRCLLTEGRERPDMGEVEVELEHALKFQVEADAKS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03434 334 Gene3D Phosphorylase Kinase; domain 1 35 126 - -
Aip04g03434 334 Pfam Protein tyrosine and serine/threonine kinase 55 318 IPR001245 GO:0004672|GO:0006468
Aip04g03434 334 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 23 333 - -
Aip04g03434 334 PANTHER OS07G0166700 PROTEIN 23 333 IPR045272 GO:0004714|GO:0006468
Aip04g03434 334 PIRSF ILK 18 331 - -
Aip04g03434 334 Gene3D Transferase(Phosphotransferase) domain 1 127 333 - -
Aip04g03434 334 ProSiteProfiles Protein kinase domain profile. 50 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03434 334 SUPERFAMILY Protein kinase-like (PK-like) 25 319 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03434 Aip-Chr4 128854617 128855621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03434 28 331 Receptor kinase-like Gene Family AT3G51550 46.104 2.96e-86 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03434 PK_Tyr_Ser-Thr 8.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03434 - - aip:107638149 515.768