Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03432 ATGCTTCTCAAGTGTATAAGCTTTCCTGTTTCAAAGAAGACAAGCTCATCCAAGAAGCACTCTCCAACGGTTATAGAATTGTTATGCCATCAATTTTCCCTGGAAGATCTTAAAAGATCAACCAACAACTTCAACCAGAAATTAATAGTTGGAAAAGGAGGTTTTAGCACTGTATACAAAGGATGTCTCAAACACAATGGTGGATCAGACCATACAATTGCATTAAAGCTCAAGTGTTGCAACTCCAACCAGCATTTCCTCGAGTTCATGAAGGAAATTGAGTTGCTATGCCAGCTTCATCATCCTAATTTGATCTCTCTTGTAGGATTTTGCAACCATGAAAAGAAAAAGATTATTGTGTATGAGTTCATGTGCAATGGCTCTCTTCATGATCACCTATACAATAGGGACAAGACACCACTATCATGGCAGAAAAGGCTAGAGATATGTATAGGAATCGCACGTGGACTACACTACCTTCATGCTGGAGCCAAGCGTTCTATCTTTCATTGTGACATAAGACCTAGTAACATTCTTTTGGATTGCAATATGGTGCCTAAGCTCTCAGACTTTGGGCTTTCATTGCAGGGACCACTATCTACTTCCAAGCGAAAACCAATTGCAGTAGACTATGTTATAG 640 0.3953 MLLKCISFPVSKKTSSSKKHSPTVIELLCHQFSLEDLKRSTNNFNQKLIVGKGGFSTVYKGCLKHNGGSDHTIALKLKCCNSNQHFLEFMKEIELLCQLHHPNLISLVGFCNHEKKKIIVYEFMCNGSLHDHLYNRDKTPLSWQKRLEICIGIARGLHYLHAGAKRSIFHCDIRPSNILLDCNMVPKLSDFGLSLQGPLSTSKRKPIAVDYVI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03432 213 ProSiteProfiles Protein kinase domain profile. 44 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03432 213 Gene3D Phosphorylase Kinase; domain 1 5 123 - -
Aip04g03432 213 PANTHER OS07G0166700 PROTEIN 15 209 IPR045272 GO:0004714|GO:0006468
Aip04g03432 213 ProSitePatterns Tyrosine protein kinases specific active-site signature. 168 180 IPR008266 GO:0004672|GO:0006468
Aip04g03432 213 ProSitePatterns Protein kinases ATP-binding region signature. 50 76 IPR017441 GO:0005524
Aip04g03432 213 PANTHER TYROSINE KINASE FAMILY PROTEIN 15 209 - -
Aip04g03432 213 Pfam Protein tyrosine and serine/threonine kinase 49 196 IPR001245 GO:0004672|GO:0006468
Aip04g03432 213 SUPERFAMILY Protein kinase-like (PK-like) 19 201 IPR011009 -
Aip04g03432 213 Gene3D Transferase(Phosphotransferase) domain 1 124 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03432 Aip-Chr4 128847527 128848166 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03432 15 203 Receptor kinase-like Gene Family AT5G39000 50.000 9.07e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03432 PK_Tyr_Ser-Thr 4.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03432 - - adu:107486597 429.869