Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03431 ATGCAATCAGCAACAAATAACTTCCATAATTCTTTTAAAGTTGGAGAAGGCTCCTTTGGCAATGTCTACAAAGGTTATCTGGAAAACAGTTCTACACCAGTTGCCATCAAACGGTGCAAGAAGGATTCACTTTTTGGTCTTTCCAGCTTGAAGAATGAGGTTGTCCTGCTTTCTCAGCTGCAACATCCCAATCTCATCTCCTTAGTTGGATTCTGCATTGAAGGAACTGAGTTGGTTCTTGTATATGATTACATGTCTAATGGTTCCATTCGTGATCATCTTCAACGGGGGAACATCGATCTACTTCCATGGAAGAGGAGGCTTCAAATTTGCATAGGAGTGGCGCGTGCACTGCACTATCTTCACACAGGAGCCAAGTACACTATTATCCACCGGAACATTAAAACACGTCACATTCTTTTGGATAGTAATTGGGAACCAAAAGTTTCAAGCCTATTAATATCCAAAAGGGGAGCACTTAGTACTTCAAAGTCATTGACAAGGGTGGAGTCAGATGTGAAGGGAACATTGGGGTATCTTGATCCGGAATATTTCAGAACAAATATGTTAACTGAAAAATCAGATGTATTTTCATTTGGCATAGTTCTATTAGAAGTTGTGAGTGCAAAGCCGGCACTCGAGATTTACAGAGAATACTTTGAAGGCTTTAATCAGTCACTGAGGTCATCTGCAAATGAAATTGTTGATCCAATTCTTAAGTCTAAGATTGATCCAGATTGTTGGAAAACATTTGTTGACATCACTAAGAGATGTTTGCTTTTGGAGGGAAGGGAAAGGCCAGATATGGGAGAAGTGGAGGTGGAACTTGAACATGCACTAAAATTGCAAGAGGAAGCTGATGCCAAGAATTAA 873 0.4009 MQSATNNFHNSFKVGEGSFGNVYKGYLENSSTPVAIKRCKKDSLFGLSSLKNEVVLLSQLQHPNLISLVGFCIEGTELVLVYDYMSNGSIRDHLQRGNIDLLPWKRRLQICIGVARALHYLHTGAKYTIIHRNIKTRHILLDSNWEPKVSSLLISKRGALSTSKSLTRVESDVKGTLGYLDPEYFRTNMLTEKSDVFSFGIVLLEVVSAKPALEIYREYFEGFNQSLRSSANEIVDPILKSKIDPDCWKTFVDITKRCLLLEGRERPDMGEVEVELEHALKLQEEADAKN 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03431 290 ProSiteProfiles Protein kinase domain profile. 8 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03431 290 Pfam Protein tyrosine and serine/threonine kinase 13 274 IPR001245 GO:0004672|GO:0006468
Aip04g03431 290 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 2 289 - -
Aip04g03431 290 PANTHER OS07G0166700 PROTEIN 2 289 IPR045272 GO:0004714|GO:0006468
Aip04g03431 290 Gene3D Transferase(Phosphotransferase) domain 1 85 290 - -
Aip04g03431 290 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Aip04g03431 290 PIRSF ILK 1 288 - -
Aip04g03431 290 SUPERFAMILY Protein kinase-like (PK-like) 3 279 IPR011009 -
Aip04g03431 290 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03431 Aip-Chr4 128845784 128846656 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03431 1 287 Receptor kinase-like Gene Family AT3G51550 48.464 1.39e-88 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03431 PK_Tyr_Ser-Thr 5.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03431 - - aip:107638149 538.11