Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03429 ATGAAAAGTAAAAGATTATTGTGCAATGGCTCTCTTCATGATCACCTATACAATAAGGACAAGACACCACTATCATGGCAGAAAAGGCTAGAGATATGTATAGGAATCGCGCGTGGACTACACTACCTTCATGCTGGAGCCAAGCGTTCTATCTTTCATTGTGACATAAAACCTAGTAACATTCTTTTGGATAGCAATATGGTGCCTAAGCTCTCAGACTTTGGGCTTTCATTGCAGGGACCACTATCTACTTCCAAGCCAAAACCAATTGCAGTAGACTATGTTACAGGTACATTTGGATACTTAGCCCCTGAGTGTTTCCAACGCCTGACTGTTACAGATAAATGTGACGTTTACTCCTTTGGTATGGTTCTACTTGTAATGGTATGCATGAAGGAGAAGGATTTGTTTCTTAACAAGGCCAACATGTTAGGTAACCAACATTTGGAGGGGAAGAGTGAAATCAAATACTTAGAAAAGTTCATTGATGATCAAGTTCAACCATGGAATGTAATAGCCTTTATGCAGCAATTCCCAATCGAAGAGATCATTGATCCAACCCTCAGGGGAAAGATTGCACCAGAGTTTACATGTTAA 597 0.4003 MKSKRLLCNGSLHDHLYNKDKTPLSWQKRLEICIGIARGLHYLHAGAKRSIFHCDIKPSNILLDSNMVPKLSDFGLSLQGPLSTSKPKPIAVDYVTGTFGYLAPECFQRLTVTDKCDVYSFGMVLLVMVCMKEKDLFLNKANMLGNQHLEGKSEIKYLEKFIDDQVQPWNVIAFMQQFPIEEIIDPTLRGKIAPEFTC 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03429 198 Gene3D Transferase(Phosphotransferase) domain 1 7 197 - -
Aip04g03429 198 PANTHER TYROSINE KINASE FAMILY PROTEIN 7 195 - -
Aip04g03429 198 SUPERFAMILY Protein kinase-like (PK-like) 8 134 IPR011009 -
Aip04g03429 198 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03429 198 Pfam Protein kinase domain 8 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03429 198 SMART serkin_6 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03429 198 PANTHER OS07G0166700 PROTEIN 7 195 IPR045272 GO:0004714|GO:0006468
Aip04g03429 198 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03429 Aip-Chr4 128840986 128841663 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03429 7 195 Receptor kinase-like Gene Family AT1G30570 44.974 6.40e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03429 Pkinase 9.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03429 - - aip:107637342 411.379