Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03427 ATGGGTTTTCCCTTCTTTTCAAGCTTGTCTTGTTTCGGTGACTCAAGTCAAAGGGCGACAAATCCATCTTCTTCTGATCCCACACTCATCTCAACAGAACCACCTTCATCTATCATAACTGAACTCTGCCATCAGTTTACACTTGCAGAGATACAATCAGTGACAAGAAACTTCGAAAAGTCTTTGGGAGAAAGCAGGTTTGGTATTGTTCACAGAGGCTATGTAGGAAATACTTCTAAACCGGTTGCAGTCAAGCAGTATAAGAAGGACTCAGGTTTTGGTTTCTTGGAGTTCAAGAATGAGATTGTCTTGCTTTCGCAGCTGCACCACCCCAACCTCATCTCTTTGGTTGGGTTTTGCGTCGAAAGAAATGAGTTAATTCTTGTAAATGAGTTGCTTCCTAAGGGTACTCTTTATCGTCATCTTCACGGTCGAAACATTCATCCACTTCCATGGAAGAGGAGGCTACAGATTTGCATAGGCGTGGCACGTGGACTTCACTATCTTCACACTGGAGCCAAGTATACTATCATTCACCGCGACATTAAGACAAGTAACATTCTTTTGGATGATAACTGGGAGCCTAAAGTTTCAGGTTTAACACTGTCCAAAAGAGTATCTCTTAGGAGCTCAAAGTCATTGAAAAGGACTGAGTCAGATATAAAAGGAACATATGGATATAAAGATCCAGAATATGAAAGAACTGGAGTGCTGACTGAAAAATCAGATGTATATTCTTTTGGGGTAGTTCTGTTAGAAGTTGTAAGTGCAAAGCCGCCGCGGGAGATTTACAGGGAATACTTGGAAGACTGCAATCAGTCTCTCGAGTCATATGCAGAGAAAAATGTTGATCGATTTCTTAAGTCAAAGATTGAACCAGATTGTTGGAAAATATTTGTTGACATCACTGAGAGATGCTTGCTTGCAGAGGGGAGGGAGAGGCCAGACATGGGGGAAGTGGAGGTGGAGCTTCAACATGCACTGCAATTTCAGGAGGAAGCTGATAGAATATGA 1014 0.4201 MGFPFFSSLSCFGDSSQRATNPSSSDPTLISTEPPSSIITELCHQFTLAEIQSVTRNFEKSLGESRFGIVHRGYVGNTSKPVAVKQYKKDSGFGFLEFKNEIVLLSQLHHPNLISLVGFCVERNELILVNELLPKGTLYRHLHGRNIHPLPWKRRLQICIGVARGLHYLHTGAKYTIIHRDIKTSNILLDDNWEPKVSGLTLSKRVSLRSSKSLKRTESDIKGTYGYKDPEYERTGVLTEKSDVYSFGVVLLEVVSAKPPREIYREYLEDCNQSLESYAEKNVDRFLKSKIEPDCWKIFVDITERCLLAEGRERPDMGEVEVELQHALQFQEEADRI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03427 337 ProSiteProfiles Protein kinase domain profile. 56 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03427 337 Gene3D Transferase(Phosphotransferase) domain 1 133 336 - -
Aip04g03427 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Aip04g03427 337 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 16 335 - -
Aip04g03427 337 PANTHER OS07G0166700 PROTEIN 16 335 IPR045272 GO:0004714|GO:0006468
Aip04g03427 337 SUPERFAMILY Protein kinase-like (PK-like) 25 320 IPR011009 -
Aip04g03427 337 Pfam Protein tyrosine and serine/threonine kinase 58 322 IPR001245 GO:0004672|GO:0006468
Aip04g03427 337 Gene3D Phosphorylase Kinase; domain 1 43 132 - -
Aip04g03427 337 SMART serkin_6 56 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03427 Aip-Chr4 128818631 128819725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03427 9 335 Receptor kinase-like Gene Family AT3G51550 44.118 1.26e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03427 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03427 - - adu:107486248 400.593