Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03426 ATGGGTGTTCTTTCAGTTTTGTCTTGTTTCATTAAACCATCTTCTGATTCTTATCCAACACTCATGTCAGCAAAACCACCTTCATCCATTGTAAATGAACTTTGCCATCAGTTTTCTCTTGCAGAGATACAATCAGCAATAGCAAGAAATCCCAACGAGTTTTCGAAACTAGGACAACCCCGTGGATTCAAGAATGTTTTCAAAGGTTATCTGCAGAATAGTAATATCCCAATTGCCATCAAGAGGTGCAGCATTGGATCATTTTCACAGCAGCTGTTCTCAGAGTTCAAGAATGAGATTGTCTTGCTTTGTCAGCTGCACCATCCTAATCTCATGCCTCTAACCGGATTCTGTATCGAAAGAAACGAGTTGATTATCGTGTACGAATACATGTCTAATGGCTCCCTTTTTGATCATCTTCATCATATATACCATGATCCACTTTCATGGAAGAGGAGGCTTCAAATTTGCATAGGTGTGGCTCGTGGACTTCACTATCTTCACACTGGAGCCAAGCATGTTATCATCCACCGCCACATTAAGACAAGTAACATTCTTTTGGATGATAACTGGGAGCCTAAAGTTTCAGGTTTGTCACTGTCCAAAAGGGTTCCTCTTAGTATCTCAAAGTCATTGATTAGAGTGGAGTCAGATGTAAAAGGAACATTTGGATATCTTGATCCAGAATATGTAAGAACCGGAGTGCTTACCGAAAAATCAGATGTATTTTCATTCGGTGTAGTTTTGTTAGAGGTTGTGAGTACAAGAACAATGCAAAAGGAACGTTTGTATAACCAGATTCATTCAATGAAATCATATGCAGAGGAAATTGTTGATCCATTTCTCAAGTCAAAGATTGATTCAGATTGTTGGAGAACTTTTGTTGACATCACTGAGAGATGTTTGGCTGAAGATGGAAGGGAGAGGCCAGACATGGGGGAAGTGGAGTTGGAGCTTGAACATGCACTGCAATTGCAAGAGGAAGCTGATGCCAAGATTATTGGTTCAGAAAATTTTGATAGAATATGA 1029 0.3955 MGVLSVLSCFIKPSSDSYPTLMSAKPPSSIVNELCHQFSLAEIQSAIARNPNEFSKLGQPRGFKNVFKGYLQNSNIPIAIKRCSIGSFSQQLFSEFKNEIVLLCQLHHPNLMPLTGFCIERNELIIVYEYMSNGSLFDHLHHIYHDPLSWKRRLQICIGVARGLHYLHTGAKHVIIHRHIKTSNILLDDNWEPKVSGLSLSKRVPLSISKSLIRVESDVKGTFGYLDPEYVRTGVLTEKSDVFSFGVVLLEVVSTRTMQKERLYNQIHSMKSYAEEIVDPFLKSKIDSDCWRTFVDITERCLAEDGRERPDMGEVELELEHALQLQEEADAKIIGSENFDRI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03426 342 Gene3D Phosphorylase Kinase; domain 1 18 130 - -
Aip04g03426 342 PANTHER OS07G0166700 PROTEIN 24 332 IPR045272 GO:0004714|GO:0006468
Aip04g03426 342 ProSiteProfiles Protein kinase domain profile. 52 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03426 342 Gene3D Transferase(Phosphotransferase) domain 1 131 339 - -
Aip04g03426 342 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 24 332 - -
Aip04g03426 342 Pfam Protein tyrosine and serine/threonine kinase 63 316 IPR001245 GO:0004672|GO:0006468
Aip04g03426 342 SUPERFAMILY Protein kinase-like (PK-like) 62 315 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03426 Aip-Chr4 128817365 128818393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03426 14 342 Receptor kinase-like Gene Family AT3G51550 43.988 4.87e-84 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03426 PK_Tyr_Ser-Thr 3.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03426 - - adu:107486248 648.662