Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03425 ATGGGTTTGTTTTGTTTGTGGTGTAATACAAGGCCAAGGGAAACAAAACAACCTTCAACCACCATACAAGAACTTTGTCATCAATTTTCTTTTGCTGAGATACAATCAGCAACATGTAACTTCAATGAGTCTTTGGTAATTGGACAAGATGGAATTGGCACTTTTTACAAAGGTTTTATAGAGACAAGTTCTACCCATGTTGCCATCAAACACTGCAACAAGGATTCTCTTGATCTCGGGTTTAAGCATGAGGCTGTTTTGCTTTGTCAGCTTCACCATCCCAATCTGATTCCTCTAGTTGGATTTTGCATCGAAAGGAACGAGCTCATTCTTGTGTATGAGTACATGTCCAATGGCTCCCTTTATGATCACATTCATGGTAGAAACTTTAATCCACTTTCATGGAAGAGGAGGCTTCAAATTTGCATTGGGGTGGCGCGTTCACTGCACTATCTTCATACAGGAGCCAAATATGTTATCATTCATCGTGATGTTAAGACAAGTAACATTCTTTTGGATAGTAGTATGGAGCCTAAAGTTTCTGGTTTAACATTTTCCAAAAGGGGACCTCTTAGTATCTCAAAGACATTGACAAGGGTGGAGTCCAGGGTGCTGGGAACATGGGGATATGCTGATCCAGAATATGTGGCAACTGGTTTTTTGACCGAAAAATCAGATACATATTCATTTGGAATAGTTTTGTTAGAAGTTTTGAGTGCAAAGCTGGCACTAGACATTCACAAGGAACACTTGGAAAACTGCAATCAATCACTCAAGTCATATGCAGAGGAAATCGTTGATCCTTTTCTTAAGTCAAAGATTGCTCCAGATTGTTTGAAAACATTTTTTGACATCACTGAGAGATGTTTGCTCAAAGAGGGAAGGGAGAGGCCAGACATGGGGGAAGTGGAACTCCAACTTGAACATGCACTAAAATCTCAAGAGGAAGCTGATGCCAAGATTTGA 966 0.3996 MGLFCLWCNTRPRETKQPSTTIQELCHQFSFAEIQSATCNFNESLVIGQDGIGTFYKGFIETSSTHVAIKHCNKDSLDLGFKHEAVLLCQLHHPNLIPLVGFCIERNELILVYEYMSNGSLYDHIHGRNFNPLSWKRRLQICIGVARSLHYLHTGAKYVIIHRDVKTSNILLDSSMEPKVSGLTFSKRGPLSISKTLTRVESRVLGTWGYADPEYVATGFLTEKSDTYSFGIVLLEVLSAKLALDIHKEHLENCNQSLKSYAEEIVDPFLKSKIAPDCLKTFFDITERCLLKEGRERPDMGEVELQLEHALKSQEEADAKI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03425 321 PANTHER OS07G0166700 PROTEIN 15 319 IPR045272 GO:0004714|GO:0006468
Aip04g03425 321 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 15 319 - -
Aip04g03425 321 ProSiteProfiles Protein kinase domain profile. 41 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03425 321 Coils Coil 244 264 - -
Aip04g03425 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Aip04g03425 321 Gene3D Transferase(Phosphotransferase) domain 1 116 320 - -
Aip04g03425 321 SMART serkin_6 41 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03425 321 Pfam Protein tyrosine and serine/threonine kinase 47 305 IPR001245 GO:0004672|GO:0006468
Aip04g03425 321 Gene3D Phosphorylase Kinase; domain 1 6 115 - -
Aip04g03425 321 SUPERFAMILY Protein kinase-like (PK-like) 16 307 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03425 Aip-Chr4 128814925 128816858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03425 19 318 Receptor kinase-like Gene Family AT3G51550 47.910 3.18e-83 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03425 PK_Tyr_Ser-Thr 9.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03425 - - adu:107486248 600.897