Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03424 ATGGGGATAATGCTTGATAAGTATTTGAGTTTCTGCCATTCAGAGCATGTAAGTTCATCTAAGAAGCTGTATCCATCAATAATTGAAGAGCTATGCCCACAGTTCTCTCTTGAAGATCTTAGGAAATCAACCAACAACTTTGATGCAAACCATTTAACTGAAATATCAGCATATAATAGAGTATACAAATGTTGTATCAAACATAATGGTGCAAGTGATTTCACAGTGGCATTGAAGAGGTTGAATCGCGAAACCGACCTATGGAAGTTCAAGAAGGAAATCGAATTCCACTTCCAACTTCACCATCCAAATTTAGTCTCCCTTATAGGATTCTGCAACCACAAAGATGAGAAGATTCTTGTGTACGAACACATGTCCAATGGCTCTCTCTATGATTACCTATGTTCCAAGAATATAGAAGATTTGTCATGGAAGAAATTGTTAGAAATATGCATTGGAGCAGCAAAAGGACTACACTATCTTCACACAGGAACCAAGTGCCCCATCTTTCACTGTGACATGAAACCTCATAACATTCTTTTGGACAAAAACATGGTACCTAAACTCTCACATCTTGGATTTTCCTTGCAGGGGCCACCTTTGAATTCAAAACCAAAACCAGTAAAAGTTGACATGGTTATGGGTTCAGCTGGTTACATAGCACCTGAGCATGTCCTAACCAGAATCTTCACAGATAAATGTGATGTTTATTCATTTGGTATGGTCCTAATAGAAGTTGTATCCACTACTTACAAGCACACCATCTTTGACAAAATCATCATGTTGGAGAGCTCATCAGATTTCTCTCTCGATCCATTTGATTTAATGAATCCATTCGTGGATATATCTGAAATGTTGGAGAGATTCTCAGTTGATGAGATTATTGATCCAATTCTGATGAGAAAGATAGCACCAGAATGTTTGGCAGTATTCATAGATGTCACAAAAAGATGCTTGAGCAGAGAAGCAAATGAAAGACCAAATATAGGTGAAGTAGAGGTTGAACTGGAGCTAGCACTAGCACTGCAAGAGGAGGCCGATGACCGGAATCATGGTGGTGGCTGGTGA 1068 0.3886 MGIMLDKYLSFCHSEHVSSSKKLYPSIIEELCPQFSLEDLRKSTNNFDANHLTEISAYNRVYKCCIKHNGASDFTVALKRLNRETDLWKFKKEIEFHFQLHHPNLVSLIGFCNHKDEKILVYEHMSNGSLYDYLCSKNIEDLSWKKLLEICIGAAKGLHYLHTGTKCPIFHCDMKPHNILLDKNMVPKLSHLGFSLQGPPLNSKPKPVKVDMVMGSAGYIAPEHVLTRIFTDKCDVYSFGMVLIEVVSTTYKHTIFDKIIMLESSSDFSLDPFDLMNPFVDISEMLERFSVDEIIDPILMRKIAPECLAVFIDVTKRCLSREANERPNIGEVEVELELALALQEEADDRNHGGGW 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03424 355 Gene3D Phosphorylase Kinase; domain 1 8 124 - -
Aip04g03424 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Aip04g03424 355 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 351 - -
Aip04g03424 355 ProSiteProfiles Protein kinase domain profile. 47 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03424 355 SMART serkin_6 47 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03424 355 Gene3D Transferase(Phosphotransferase) domain 1 125 352 - -
Aip04g03424 355 Pfam Protein tyrosine and serine/threonine kinase 57 333 IPR001245 GO:0004672|GO:0006468
Aip04g03424 355 SUPERFAMILY Protein kinase-like (PK-like) 22 336 IPR011009 -
Aip04g03424 355 PANTHER OS07G0166700 PROTEIN 18 351 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03424 Aip-Chr4 128811763 128814089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03424 14 352 Receptor kinase-like Gene Family AT3G51550 36.364 4.92e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03424 PK_Tyr_Ser-Thr 3.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03424 - - ahf:112797906 496.123