Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03422 ATGATATTATTGTTATTCTTATTAGTTCTTCACCAACAACACTATTTCATCAAACCTATATACGCCTATTCTCGTGTAGAAGATTTAGCAATCAACTGTGGCACTGAATCAAACTCTATTGTTCTAGCTAACAAGCGAATTTGGATTGGAGACGCTACCAATTCGAAACACTTTTCTGTCTTAGAATCATCACCACAGAAGAATCAATCTTCAATATCTGTTGCTACTCCTCATCGTGATGATCCTTATGGCACTTCAAGAATCTCTCACTATGAATTCACATATTCAATTCATGGTGTCACTCCTGGTCACAAGTTCATTAAGCTTCACTTCAACCCTGCTTCATACCCCAATTTCCATCCTTCTAAGTCCGTGTTTTCTGTGAAAGCAGGACCTTATACTCTTCTCAGGGACTTCAACGCTTCAGGTGCTGCTCAAGAACACCGAGATCATCATCATCATAGTGATCCAAACAAGATTCTACTTATTGAGTATCAGCACTGCATAAAAGTTGAACCAGGTCAGAATCTAACCTTGACCTTCATCCCAAACACCACTCATAAAGATTCTTATGCCTTTGTTAATGGGATTGAGGTCATGTCTTTGTTCAAGTACCATGATCAATGCAACAAGCAAAAGAAATCGAGGTTCAGATTTTCTGAGGTAGTTCATCATGAAGAGTCATGCATGAATTGTTCACCATCAGCACAACCACCACCATCGCAGACAAAGCCTGCATCAATATCTGGTGGTGTTCTTTACTGTGTCATTGCAGTTTCTGTTTTCATTTCGATGTCTTCTATTTTCCTCTTATGTATCTGGGTTTGGAGAAACTCTAGAATGAAGCACAAGGCCAAGATGGAATTGATCTATGAAGAGACAACAAATTCAAGAAAATCATCAATAACACTGGCCTCAGGGAACTCATGTCGTTGCTTCTCAATCATTGAGATAAGTGCAGCCACCATCAACTTCGATGACATCTTTGTTGTTGGTGTTGGAGGTTTTGGCAAAGTTTACAAAGGCTATATCGATGATGGCACGAAGCCTATCGCCATCAAGCGCTTCATCCCTGAAAATGGTGTGCAAGGTGTTCAAGAGTTCAAGAACGAGGTCGAGATGTTGTCTCAACTTAGCCACCCTCATTTGGTGCCTTTGATTGGTTATTGCAACGACGAAGACGACATGATAATCGTCTATGATTTCATGGCGAATGGGACCCTCCGGGATCATCTGTATGGGACTTGTAATACACCTCTTTCATGGAAGCAAAGACTTAAGATATGCATAGGGGCAGGGCTAGGATTGGAATATCTCCACAGTGGAGCAAAATTCAAGATCATTCATCGTGATGTGAAGACATCAAATATCTTGTTGGATGAGGAATGGGTGGCTAAGGTTTCTGATTTTGGGTTGTCCAAAATTGGACCAAATGGGGAGTCAAAGTTCCATGTTAGCACAGAGGTTAAGGGTAGTCTTGGATATTTAGACCCTGAATACTCAAAGACTAAGAGGTTGACTCATAAATCTGATGTGTATTCTTTTGGTGTGGTGTTGCTTGAGGTGTTGTGTGGTAGGGCACCTTTGCTTAGAAAAGTTGAGGGACCAAAGAGGTGCCTTGTGGAATGGGCAAGGTCCTGCCAAAGTGAGGGACCCCATGCCATTGACCAAATGGTTGATCCGTTTATTAGGGGCAAGATTGTCCAAGAATGTTTGAGCAAGTTTGTTGAGATGGCACTGAATTGTGTTGTTCATGAAGGAAATCAGAGGCCATCAATGGGACAAGTGGTGGAGGGACTTGAACTTGCCTTGCAGCTTCAACTAAAATCAGAAGACTGA 1839 0.416 MILLLFLLVLHQQHYFIKPIYAYSRVEDLAINCGTESNSIVLANKRIWIGDATNSKHFSVLESSPQKNQSSISVATPHRDDPYGTSRISHYEFTYSIHGVTPGHKFIKLHFNPASYPNFHPSKSVFSVKAGPYTLLRDFNASGAAQEHRDHHHHSDPNKILLIEYQHCIKVEPGQNLTLTFIPNTTHKDSYAFVNGIEVMSLFKYHDQCNKQKKSRFRFSEVVHHEESCMNCSPSAQPPPSQTKPASISGGVLYCVIAVSVFISMSSIFLLCIWVWRNSRMKHKAKMELIYEETTNSRKSSITLASGNSCRCFSIIEISAATINFDDIFVVGVGGFGKVYKGYIDDGTKPIAIKRFIPENGVQGVQEFKNEVEMLSQLSHPHLVPLIGYCNDEDDMIIVYDFMANGTLRDHLYGTCNTPLSWKQRLKICIGAGLGLEYLHSGAKFKIIHRDVKTSNILLDEEWVAKVSDFGLSKIGPNGESKFHVSTEVKGSLGYLDPEYSKTKRLTHKSDVYSFGVVLLEVLCGRAPLLRKVEGPKRCLVEWARSCQSEGPHAIDQMVDPFIRGKIVQECLSKFVEMALNCVVHEGNQRPSMGQVVEGLELALQLQLKSED 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03422 612 ProSitePatterns Protein kinases ATP-binding region signature. 331 354 IPR017441 GO:0005524
Aip04g03422 612 Pfam Malectin domain 28 149 IPR021720 -
Aip04g03422 612 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 257 611 - -
Aip04g03422 612 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 23 207 - -
Aip04g03422 612 Pfam Protein tyrosine and serine/threonine kinase 331 599 IPR001245 GO:0004672|GO:0006468
Aip04g03422 612 CDD STKc_IRAK 340 601 - -
Aip04g03422 612 Gene3D - 29 202 - -
Aip04g03422 612 PANTHER OS07G0166700 PROTEIN 257 611 IPR045272 GO:0004714|GO:0006468
Aip04g03422 612 PANTHER OS07G0166700 PROTEIN 23 207 IPR045272 GO:0004714|GO:0006468
Aip04g03422 612 SUPERFAMILY Protein kinase-like (PK-like) 301 604 IPR011009 -
Aip04g03422 612 Gene3D Phosphorylase Kinase; domain 1 284 402 - -
Aip04g03422 612 SMART serkin_6 325 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03422 612 Gene3D Transferase(Phosphotransferase) domain 1 403 611 - -
Aip04g03422 612 ProSiteProfiles Protein kinase domain profile. 325 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03422 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03422 Aip-Chr4 128806424 128808262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03422 295 612 Receptor kinase-like Gene Family AT3G51550 59.119 2.57e-118 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03422 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03422 - - adu:107486605 1196.8