Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03421 ATGAAAACTCAAGTGACAAAGGTTATGAAAACGGTTATGAAAATTCTGGAAATGTTTACTCAAGCATCAAGGCTAAAGGGACAAGTTGTGGGTGCAGGTTCTAACTCACAAATACCTCCGGAACTCCAAGGACATGGGCATCATTCGATGTCACAACGCCTCAACTACTTGGAGGAATATTCTAAAGGCTTACGATATCTTAAAAGAAGGATTTTGATGGAGTGTGGAAAATATGCAACAATCGATTTGGTATCCCTTTGGAGTTTTGGATTCGGAATGAAGGTCATGTCGGGCAATGAGGCAATTGTAGGGGCAGAGGAGCAAGAATTACGCACAACACGTCACTTCCTTCAACATAACAGCGTTTCTGAACCTCTCGGGGAGGGTGCATCATCATACCATCCTGACGATGATTTTGCTGTCAACTGTGGCTCATCAAAAGAAACCACAGTCTACGCTGGTCGGAAATGGGTAGGAGACGTTGACTCCAAACTATTTTCTACCATTGAGCAACCACAAACTAAGCAACCATCTCTCATAACTCATACTCCATATCCTCTTTCAGCTAACTCATTTGCGTTTAGCTCTGCACGCATTTTCCTTTCCAATTTCACATACTCCTTCCCTCTCAAAACTAATGGCCCCAAGTTTCTTCGGCTTCACTTTTATCCAACAAATTATCCCAACTCTGAACCCTACAACACCCTTTTTTCCGTTACAGCGGGCAATTTCACCCTTCTCAAGGATTTCAATGCTTCACGTTGGCTCGCCAATGACGAAATGACCTTTTTCATAGAATACTGTGTCAACGTAGAAACAGGAAAGAGGCTTGACCTCACCTTCATTCCCAGAAAATCTTATTATGCTTTCATCAACGGGATTGAGGTGGTCTCCATGCCTCCCTACCTCTATTACACGGACCCCAGCAAGTCCTCCGGAATCAACGTTGGTGAAACACAGATTGCACCAGAGCAAGATACTGGTATGTACAGGTCTTGGGAACCGGATGCCGATTACATAGAGAAGCAGTATCCGTCGAGTATTTCATTCGGCTATCCACCACTGAAATTCAACAGTAATATTACTCGAGATTACACTGCACCTAGCCTTGTTTACTTGAGTGCGCGAAGCTACGGGATGCGCGAGACCAAGAATTATAACGTGACTTGGCGGTTTGAAGTGGATTCACAGTTTACTTACATGGTCAGTTTACATTTTTGTGAGTATGCGCCACAAATCAAACGCTATACCGACAGATCTTTTCAGATATTTATATCAGAGCTTTTGGCTGAGGATTGCGCCGATGTGATTGGCTGGAGTGGTGGTAATCACGTTCCTGTTCGAAGGGATTATGTTTTTCAGCTTCTCTCTGATGACCCAGGGCAAAGTTCTAAGAAAGTCAACATTTCCATCAAGCTTCAACGACTGCCAAATGCCGAGTTAACCAACTACCATGATGTCATATTGAATGGCATCGAGATCTTCAAAATCAGTGATGCTACCAACAATCTCGCAGGACCCAATCCAGAACATGTTCGAACTTCCACACAAGAATCACAGAAGTTGCCACAATCATCCAAACACTCAAAGAAAAAGATAATCACTGTTATCGTTGCTGTTATTGCAGTTTCATGCCTCGTGCTGACATCTGTTATTGGAATCATCATTTTCAGTTGGAGGAGGAGGAGTTTTGATTATAGGGAGGGAACCACAAAAAAGGAAGGTTCATCATCGCTGCCATCACACTTATGCCGCTACTTTACAATCGCAGAGATCAGAGCTGCCACAAACAACTTCGACGATGTGTTCATCATCGGGGTTGGAGGGTTCGGTAACGTTTACAAGGGCTACATCGATGAGGGTGCAACCCCCGTGGCCATCAAGCGTCTCAAACCCGGTTCTCAACAAGGCATCAACGAGTTCCTTAACGAGATTGATATGCTTTCCCAGCTCCGGCACCTTCATTTGGTGTCCCTCATTGGTTACTGCAACGATGGCGTAGAGATGATCCTCGTCTATGACTTCATGCAACGTGGCACTCTCCTTGAGTATCTCTACGGTTCAGATAACAAACCTCTTCTTTGGAAGCAGAGGCTCGAAATCCTATTAGGCACAGCAAGAGGGCTGCATTATCTTCATGCAGGTGCGAAGCACAATATCATCCACCGTGACGTCAAGAGCACAAATATCTTATTGGACGAGAAATGGGTGGCCAAGGTTTCCGACTTTGGATTATCCAAAGTAGGACCCACCGGGACTTCCCAAACCCACGTCAGCACCATGGTTAAGGGTAGCCTTGGGTATTTAGACCCTGAGTACTACAAGCGTCAACGCTTGACTTTAAAATCTGACGTGTACTCTTTCGGTGTAGTCCTTCTTGAGGTATTGTGTGCGAGGCCGCCTTTGATCCGTCACGTGGACAAGCACAAGGCCAGCTTGGTTGACTGGGTAAGAAAACTGAATGATCAGGGTAAGCTCGATCAGACGGTGGATATTTTCTTGAAAGGCTCAATCACGCCAGAGTGTTTGAAATGGTACGGTCAATTGGCGATGAGTTGTTTGCATGATGATGGAAATCAACGGCCATCGATGAATGATGTGGTCGGGGCACTCGAGTTTGCAATGCAGTTGGCCGAAGGCGACAAAGATAATAGTTTTGGTGGGGCCCAACAAAAGGAAAAGGGTGAGGAGAGACCGTTGATACCGCAGTTTACGAGTGATGAAGGGAGTGACGTGCTTTTTACTAGTGATGAATAA 2757 0.4516 MKTQVTKVMKTVMKILEMFTQASRLKGQVVGAGSNSQIPPELQGHGHHSMSQRLNYLEEYSKGLRYLKRRILMECGKYATIDLVSLWSFGFGMKVMSGNEAIVGAEEQELRTTRHFLQHNSVSEPLGEGASSYHPDDDFAVNCGSSKETTVYAGRKWVGDVDSKLFSTIEQPQTKQPSLITHTPYPLSANSFAFSSARIFLSNFTYSFPLKTNGPKFLRLHFYPTNYPNSEPYNTLFSVTAGNFTLLKDFNASRWLANDEMTFFIEYCVNVETGKRLDLTFIPRKSYYAFINGIEVVSMPPYLYYTDPSKSSGINVGETQIAPEQDTGMYRSWEPDADYIEKQYPSSISFGYPPLKFNSNITRDYTAPSLVYLSARSYGMRETKNYNVTWRFEVDSQFTYMVSLHFCEYAPQIKRYTDRSFQIFISELLAEDCADVIGWSGGNHVPVRRDYVFQLLSDDPGQSSKKVNISIKLQRLPNAELTNYHDVILNGIEIFKISDATNNLAGPNPEHVRTSTQESQKLPQSSKHSKKKIITVIVAVIAVSCLVLTSVIGIIIFSWRRRSFDYREGTTKKEGSSSLPSHLCRYFTIAEIRAATNNFDDVFIIGVGGFGNVYKGYIDEGATPVAIKRLKPGSQQGINEFLNEIDMLSQLRHLHLVSLIGYCNDGVEMILVYDFMQRGTLLEYLYGSDNKPLLWKQRLEILLGTARGLHYLHAGAKHNIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGTSQTHVSTMVKGSLGYLDPEYYKRQRLTLKSDVYSFGVVLLEVLCARPPLIRHVDKHKASLVDWVRKLNDQGKLDQTVDIFLKGSITPECLKWYGQLAMSCLHDDGNQRPSMNDVVGALEFAMQLAEGDKDNSFGGAQQKEKGEERPLIPQFTSDEGSDVLFTSDE 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03421 918 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 131 884 - -
Aip04g03421 918 MobiDBLite consensus disorder prediction 886 901 - -
Aip04g03421 918 Gene3D Transferase(Phosphotransferase) domain 1 676 892 - -
Aip04g03421 918 MobiDBLite consensus disorder prediction 506 525 - -
Aip04g03421 918 Gene3D - 312 498 - -
Aip04g03421 918 Gene3D - 139 299 - -
Aip04g03421 918 Pfam Protein tyrosine and serine/threonine kinase 605 870 IPR001245 GO:0004672|GO:0006468
Aip04g03421 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Aip04g03421 918 SUPERFAMILY Protein kinase-like (PK-like) 575 874 IPR011009 -
Aip04g03421 918 MobiDBLite consensus disorder prediction 506 523 - -
Aip04g03421 918 ProSiteProfiles Protein kinase domain profile. 599 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03421 918 PANTHER OS07G0166700 PROTEIN 131 884 IPR045272 GO:0004714|GO:0006468
Aip04g03421 918 Pfam Malectin-like domain 141 497 IPR024788 -
Aip04g03421 918 ProSitePatterns Protein kinases ATP-binding region signature. 605 628 IPR017441 GO:0005524
Aip04g03421 918 SMART serkin_6 599 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03421 918 Gene3D Phosphorylase Kinase; domain 1 584 675 - -
Aip04g03421 918 MobiDBLite consensus disorder prediction 881 918 - -
Aip04g03421 918 CDD STKc_IRAK 605 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03421 Aip-Chr4 128794259 128801313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03421 130 887 Receptor kinase-like Gene Family AT3G51550 46.210 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03421 Malectin_like 2.2e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03421 - - mtr:MTR_7g015420 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03421 04 128794259 128801313 Aip04g03421 04 128794259 128801313 ECH