Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03418 ATGTATGGTACGGAAGCACCGATGATTAGCCTCTATATGCTAATATTTTTGCTGCTTCAGTTGTCGTTCCGGATGCCACTGGTGATTTCATACAATCCTGTCGATAAATTGGCAGTCAGCTGCGGCTACTCCGGTAACGCAAACCAGCGTGGTCGGAATTGGGTTGGTGACATTGACTCCAAACTATTTTCTACCATTGAGCCACAAAATGTGCAACCATCCATAATTAAGGCTCTTACCACCCCGCCCTCAGTTGATGTGATTTACAACTCCCTTTTCTCTGTTACAGCAGATAACTTCACCCTTCTCAAAGACTTCAACGCTTCACTTTGGCTTCGCGACGGCGAAGACACCGTCTCCAAAGAATACTTGATAAATGTTGAAGCAGGTCAGAGGTTAAACCTAACCTTTGTTCCCAGCACCAAGCAGCACCAAGATGCCTATGCTTTCATCAACGGGATCGAGGTGGTGTCTATGCCTCCCTTCCTCTATTACAGCGACCCTAATAGTACTGATCAATCCGATAATGGGATTCACCTTGTTGGCTATGCCTACTCATCACCATACCAACTTGAACTTAGCAGAGCTCTTGAGACACTTTACAGAGTTAACGTTGGCGGAAGACCGATTCCTCCAGAACAGGATACAGGTATGTTCAGGAATTGGGAATCTGATGATGATCGTTACTTGGTGACCCACCGTCCGCGTAGCCAATCTGCTGGCTTTGGCCTTCACGTAAACCTCAAGAATAACACCATTCCTGATTACACTGCACCAGAAGAGTTATACTTAACTTCCCGAAGCTACGGGATGAACGCAACTGAAAACTACAACGTGACTTGGCTCTTCGATGTAGATTCGAAATTCACGTACATGGTGAGGTTGCATTTTTGTGAGTTTGAGCCAGAGGTCCAAAACTTAGGCGACAGAATCTTTCAGATCTTCATAGCTGAGACTATGGCTGAAGACAAGGCTGATGTGATTGAGTGGAGCACTGGCAACTTGATTCCAGTTCATAGGGACTACGCTGTGTTTATGTCTGACCAACGAGAAAATTCCAATAAAGTTACTCTTTCAATCAAGCTTCAACGACTACCAATTCAAAGGGCAAAAACCAATTACTATAATGTCATACTGAATGGCGTGGAGATCTTCAAAATCAGTGATGAGAGTCAAAACCTTGCAGGATCCAATCCTGACCCAATGCCCCCGCAACCGAAACCATTCTACCAATCTTCTAATAAATCCTCAAAGAAAACAATCATTGTTGCGTTCCTTACGGTCGTAGTTTCAAGCCTCCTGCTAGCATCTGTTATTGGATTAATCCTTTTCAGGAGAAAGAGGAGTTCTTCTTGTAGGAAGGGAAGCACAAAAAAAGAAGGCGCATCGTCGTCACTGCCATCACACCTCTGCCGCTACTTTACAATCGCAGAGATCAGGGCTGCCACAAACAACTTCGACGATGTGTTCATCGTCGGAGTTGGAGGGTTCGGCAACGTTTACAAGGGCTACATCGACGACGGTGCAACCCCCGTGGCCATCAAGCGTCTCAAACCCGGTTCTCAACAAGGAATCAACGAGTTCCTTAACGAGATCGATATGCTTTCCCAGCTCCGGCACCTTCATTTGGTGTCCCTCATTGGTTACTGCAACGACGGCGTAGAGATGATCCTTGTCTACGACTTCATGCAACGTGGCACTCTCCGCGAGTATCTCTACGGTTCAGACAACAACCCTCTTCCTTGGAAGCAGAGACTCGAGATCCTATTGGGCGCAGCAAGAGGGCTGCATTATCTCCATGCAGGTGCGAAGCACAATATCATCCACCGTGACGTCAAGAGCACCAACATCTTGTTAGATGAAAAATGGGTGGCCAAGGTTTCCGACTTTGGATTATCTAAAGTGGGACCTACGGGTATGTCCACAACCCACGTCAGCACCTTTGTGAAGGGTAGCCTTGGGTATTTAGACCCTGAGTACTACAAGCGTCAACGCTTGACTTTAAAATCTGACGTGTACTCGTTCGGTGTGGTCCTTCTTGAGGTATTGTGTGCGAGGCCGCCTTTGATCCGTAACGTGGACAAGCACAAGGCCAGCTTGGTTGACTGGGTAAGAAAACTGAACGATCAGGGTAAGCTCGATCAGACGGTGGATATTTTCTTGAAAGGCTCAATCACGCCAGAGTGTTTGAAATGGTACGGTCAATTGGCGATGAGTTGTTTGCATGATGATGGAAATCAACGGCCATCGATGAATGATGTGGTGGGGGCACTCGAGTTTGCAATGCAGTTGGCCGAAGGCGACAAAGATAAAAGTTTTGGTGGGGCCCAAGATAAGGAAAAGGGCGAGGAGAGCCCGTTGATACCGCAGTTTACGAGTGATGAAGGGAGTGACGTGCTTTTTACTAGTGATGAATCCGGGACCAAGGATAGTAGGGTCACCACGATTTCGGGTAGTAGTGAGGAACGTGCTATGATTTCTGGTCTGGTCTTCTCTGAAATTGGAGATCCAAGAGCAAGATAA 2523 0.4689 MYGTEAPMISLYMLIFLLLQLSFRMPLVISYNPVDKLAVSCGYSGNANQRGRNWVGDIDSKLFSTIEPQNVQPSIIKALTTPPSVDVIYNSLFSVTADNFTLLKDFNASLWLRDGEDTVSKEYLINVEAGQRLNLTFVPSTKQHQDAYAFINGIEVVSMPPFLYYSDPNSTDQSDNGIHLVGYAYSSPYQLELSRALETLYRVNVGGRPIPPEQDTGMFRNWESDDDRYLVTHRPRSQSAGFGLHVNLKNNTIPDYTAPEELYLTSRSYGMNATENYNVTWLFDVDSKFTYMVRLHFCEFEPEVQNLGDRIFQIFIAETMAEDKADVIEWSTGNLIPVHRDYAVFMSDQRENSNKVTLSIKLQRLPIQRAKTNYYNVILNGVEIFKISDESQNLAGSNPDPMPPQPKPFYQSSNKSSKKTIIVAFLTVVVSSLLLASVIGLILFRRKRSSSCRKGSTKKEGASSSLPSHLCRYFTIAEIRAATNNFDDVFIVGVGGFGNVYKGYIDDGATPVAIKRLKPGSQQGINEFLNEIDMLSQLRHLHLVSLIGYCNDGVEMILVYDFMQRGTLREYLYGSDNNPLPWKQRLEILLGAARGLHYLHAGAKHNIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGMSTTHVSTFVKGSLGYLDPEYYKRQRLTLKSDVYSFGVVLLEVLCARPPLIRNVDKHKASLVDWVRKLNDQGKLDQTVDIFLKGSITPECLKWYGQLAMSCLHDDGNQRPSMNDVVGALEFAMQLAEGDKDKSFGGAQDKEKGEESPLIPQFTSDEGSDVLFTSDESGTKDSRVTTISGSSEERAMISGLVFSEIGDPRAR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03418 840 CDD STKc_IRAK 492 759 - -
Aip04g03418 840 MobiDBLite consensus disorder prediction 393 413 - -
Aip04g03418 840 PANTHER OS07G0166700 PROTEIN 29 784 IPR045272 GO:0004714|GO:0006468
Aip04g03418 840 ProSitePatterns Protein kinases ATP-binding region signature. 492 515 IPR017441 GO:0005524
Aip04g03418 840 Gene3D Phosphorylase Kinase; domain 1 447 562 - -
Aip04g03418 840 Gene3D Transferase(Phosphotransferase) domain 1 563 779 - -
Aip04g03418 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Aip04g03418 840 Pfam Protein tyrosine and serine/threonine kinase 492 757 IPR001245 GO:0004672|GO:0006468
Aip04g03418 840 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 29 784 - -
Aip04g03418 840 Pfam Malectin-like domain 75 387 IPR024788 -
Aip04g03418 840 SUPERFAMILY Protein kinase-like (PK-like) 461 761 IPR011009 -
Aip04g03418 840 Gene3D - 85 159 - -
Aip04g03418 840 Gene3D - 195 389 - -
Aip04g03418 840 ProSiteProfiles Protein kinase domain profile. 486 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03418 840 MobiDBLite consensus disorder prediction 771 785 - -
Aip04g03418 840 MobiDBLite consensus disorder prediction 790 819 - -
Aip04g03418 840 SMART serkin_6 486 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03418 840 MobiDBLite consensus disorder prediction 769 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03418 Aip-Chr4 128751979 128754796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03418 31 840 Receptor kinase-like Gene Family AT3G51550 43.854 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip04g03418 Malectin_like 1.3e-28 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03418 - - mtr:MTR_7g015250 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03418 04 128751979 128754796 Aip04g03418 04 128751979 128754796 ECH