Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03417 ATGACGCATCTTGATACTAGTTGCAAACGAGACCTCACTGATCATTCGCTATGTGATGTGTGTCTTACTGCGGGTTTCAGGTGCAACATAAACTTGTCTCCATTGATGGGTGGTGGTTCTAGTGGGAAAAGTCACCAGGGTTTGGTTTTTGGGTTAACCGGTGCTGGTGTTGCTTTGTTACTACTTATGTCTTGTTTGTTAGGGGTTTATGTTTGGTATGATAGGAAGGTTAGGAGAAAGAAGTTTAATGATGATGAATTTGATTTTGATCTTGAGGAAAAAGGGTCTAAGCGTAGGTTGAGGCCAAATATGGGGTCTATTTGGTTTAAGATTGATGAGCTTGAGAAGGCTACTGATAATTTCTCAACCAAGAATTTCATTGGCAGCGGTGGATTTGGGCTTGTTTTCAAGGGGGTTTTGTCCGATGGTTTGGTCATGGCGGTTAAGAGGATCTTGGAATCTAATTTTCAAGGGGATGTGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACTTCAAGCACTGGAATCTGGTGCCTCTTCGAGGCTGTTGTGTAGTGGATGATGATGATGAAAAATTTAATGACAGGGGAAGCCAGGGGTTTTTGGTTTATGATTACATGCCAAATGGAAACCTTGAAGACCATCTGTTTCTGGTGAGTGAGCAGCAAAAGTTGAAGAAATCGCTGACTTGGCCTCAATGGAAGAGCATAATCTTGGATGTGGCAAAGGGGCTGGCTTATCTGTTGTGCGATGCATGTGTTCACGGCGATGCATTTATTGTTCAAATTGGGATTAGGAGGCATACAGGTTCTACTTGTAAAAGTTTGGGCTGCAATCCTCAAGGCATTGCTGCTGACAGGCTTCGATGCTTGGTTCTGCAATACCGAAGATCGGTGGTAAAAGCAAAGGCCTCAGATACAACTGAATGTGCTGCTATGGTTAATACCAATTCCCGCAGAGACTTTCTTGGATTGGCTTTGGGAATCTCAAGCCTCTTTGTTGGTTCATTGGAAGCCAAAGGAGCTGGTTTGCCCCCGGAAGATAAGCCGAAACTATGTGAGGAAGCTTGTGAGAAGGAGCTTGAAAATGAAAAGAAGCAAAAGATTAATGCAGAAAAGAAGAGGAAAGAGCTCGAAAAGGAGAGAGCGAAGGATGAACTTCTGACGAGAAAGCGCCAGAGAGAGGAAAGACGAGTGAGATACCGTGCGCAATGTGGTGGTCCAAAAGCAGCATGTGCTGGTTGTGCTGGCTTTGGGGCATTCTTAGTCGTTATAGAGAAGTTCTTAGACAGGCATGGGTAG 1302 0.4409 MTHLDTSCKRDLTDHSLCDVCLTAGFRCNINLSPLMGGGSSGKSHQGLVFGLTGAGVALLLLMSCLLGVYVWYDRKVRRKKFNDDEFDFDLEEKGSKRRLRPNMGSIWFKIDELEKATDNFSTKNFIGSGGFGLVFKGVLSDGLVMAVKRILESNFQGDVEFCNEVEIISNFKHWNLVPLRGCCVVDDDDEKFNDRGSQGFLVYDYMPNGNLEDHLFLVSEQQKLKKSLTWPQWKSIILDVAKGLAYLLCDACVHGDAFIVQIGIRRHTGSTCKSLGCNPQGIAADRLRCLVLQYRRSVVKAKASDTTECAAMVNTNSRRDFLGLALGISSLFVGSLEAKGAGLPPEDKPKLCEEACEKELENEKKQKINAEKKRKELEKERAKDELLTRKRQREERRVRYRAQCGGPKAACAGCAGFGAFLVVIEKFLDRHG 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03417 433 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 249 - -
Aip04g03417 433 Coils Coil 354 398 - -
Aip04g03417 433 Pfam Protein tyrosine and serine/threonine kinase 124 257 IPR001245 GO:0004672|GO:0006468
Aip04g03417 433 SUPERFAMILY Protein kinase-like (PK-like) 102 257 IPR011009 -
Aip04g03417 433 Gene3D Transferase(Phosphotransferase) domain 1 207 258 - -
Aip04g03417 433 ProSiteProfiles Protein kinase domain profile. 121 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g03417 433 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 40 249 - -
Aip04g03417 433 Gene3D Phosphorylase Kinase; domain 1 89 206 - -
Aip04g03417 433 ProSitePatterns Protein kinases ATP-binding region signature. 127 149 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03417 Aip-Chr4 128732636 128736934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03417 2 248 Receptor kinase-like Gene Family AT1G11050 47.931 3.82e-72 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip04g03417 PK_Tyr_Ser-Thr 1.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03417 - - gmx:100806560 324.709