Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03411 ATGTCTTCAAATAAGGTATTGAAATCAGTGAAAGATGAAAACCCAGAATTGCAGAAGCAGATTGGTTGCATCACTGGCTTTTTTCAACTCTTTGACCGCCACCGTTTCCTCACTGCCAACACTCACCAAACACCTTCTTCAACTTCAGGTGAAAGCAGTAATGGCATCAAAGAGCTTAATGCTAAAAACACAATGCAGAAAGCAAAGGAAAAGAATCTAAAGGGTTCCAGAGAGAAGCAACAATTCTCCACAGAGTCTTCAATAACTTCTATGACTTCATCATCTTGTTCATCTAGCATGTCGTCCCTCGAGTTCAACAGGACAATTCAGACCGAATCGCTATCAACCGGTCGAATCAATGTTCTTGAAAACTCGAATTCAGAACTATCATTGAAGCGCCTTGACACCCCAACACAGAAATCCATTGACTTCTATGATATTGTCAAAGAGTCAATTCAGAGAGAATCTCATGGATTGTCTGTGAAGACTTTGCCTAAAGAGCAAAAGAAGGGTCCCAATCACACCTTGAAATACATCGACTCACCCCGGCCTCTGCCTTCCCCAAAATCTGTCAATGCAGGAGTTATGGTCTCCAATGAAGCATTCCATAATCTTGCTAAGTCTAAGAAAGCGCCTTGGGACTCGCCTCGGCTGTCTTATGATGGAAGGGATACACAAGATAGATTCAAAACTGCGACAAAGCATAAGGAACTTCCAAGATTTTCCTTGGACAGCAAGCAAGGATCCATTGGAGGTCTCAATGAAGGAAACAAGTCTCGCAACCTATTGAAGGGTCCACAAAAAGGACATTTGAGAAACTCCAGCTCAGTGCTTAACCAGCCACAAGAACCAGATACTTCGAGAAGATCATCCAGTGTCGTAGCAAAGTTGATGGGACTGGAAGCATTGCCAGAATGGACACAAACTTGCCAGACTCCACCAGCGACTGCTAGTTGCTACAACAATAAAAATGAGCTCTTGGAAAGATCTAGAACAAGTGATGAATACAAGCAGCACCAAAGCTCTGTATCTCCAAGAAGTAGCCAGGAATCTACCTCGGCTCGATACAGAATTGCTGACTCGATCACAAACACAACACCATATTCGCGATTTGCTCTAGAATCAAGTCCATGGAGGCAAACTGATGCAAGCCAAAGTTCTCAACTGCAAGTTTCCAAGGGAAGTGAATCTGATGTGAAAGCCTCGAAGTCCTGCATCTCTGTATATGGGGAAATTGATAAAAGGCGGGCAGAACTCGAGTTCAAAAAGTCTGGCAAGGATCTCAGAGCCCTTAAACAAATTCTTGATGCAATGCAGAGATATAAAGATACATCTGGCAGTACTAGTGATCAGGCTTCAAAGTCTCCATCTTACAATAGAAAAATTTGCAGTCTCAATCAAGGATCAAAGTTACAAAGCCCAAGAATTCGACAAAAAGACTCGGAGTCTGTCACAAGTGAGACATCAAACACAAGCCAGGGTAGTGAATTGCCAATATTCATCATGAAACCGGAAAAAGTTGCTAGAAAATCCAGCAATCCTTCTTCTAAAGGAATGCCAGTTCGTGGTAATGGAAGATTGGCTGAGAAGCAAACAGGCAAAGATATCAATTCAACCATCAGAAATGTCAGGGATCCTTTTAGTCAATCAATTCCTTCAGCAAATAAGGGTAATAACTCGAGAACTTCAAAATCGATGCAACCATTGAAAGTTCATCTGGAAAGCAATGGAGAAAACACTAGTTCTGGTAACATAACAGCTGCTAGGAGTCCAAGGGTACAGAAGAAGTTTGGATTGGAGAGGCGCTCTCCACCAAGCAGCCCATCTTCAGATTCTGGTATTAGCAGAAGGCAGCAGTATAGGAACGCTTTGGGGTTTCCTTCTTCTCCAAGTACAACACCAAGACCGAAATTGCACGAAAGAAATGAATGTTTCAGCGAGCCTAGCGTCCATTGGAGGGATTTTAAGGCTCGTGTTAACTTCATTTCTCCAGATTTTGACAAGAGAAGCAGTGATAGAGAAATCATTCGCATGGATCAATCAGGAAATACTAATAGCACTTCCATCCAGCTTGGCAGCCTGAATCAAAATGTAAGTATTTCTTCATTGCATT 2113 0.424 MSSNKVLKSVKDENPELQKQIGCITGFFQLFDRHRFLTANTHQTPSSTSGESSNGIKELNAKNTMQKAKEKNLKGSREKQQFSTESSITSMTSSSCSSSMSSLEFNRTIQTESLSTGRINVLENSNSELSLKRLDTPTQKSIDFYDIVKESIQRESHGLSVKTLPKEQKKGPNHTLKYIDSPRPLPSPKSVNAGVMVSNEAFHNLAKSKKAPWDSPRLSYDGRDTQDRFKTATKHKELPRFSLDSKQGSIGGLNEGNKSRNLLKGPQKGHLRNSSSVLNQPQEPDTSRRSSSVVAKLMGLEALPEWTQTCQTPPATASCYNNKNELLERSRTSDEYKQHQSSVSPRSSQESTSARYRIADSITNTTPYSRFALESSPWRQTDASQSSQLQVSKGSESDVKASKSCISVYGEIDKRRAELEFKKSGKDLRALKQILDAMQRYKDTSGSTSDQASKSPSYNRKICSLNQGSKLQSPRIRQKDSESVTSETSNTSQGSELPIFIMKPEKVARKSSNPSSKGMPVRGNGRLAEKQTGKDINSTIRNVRDPFSQSIPSANKGNNSRTSKSMQPLKVHLESNGENTSSGNITAARSPRVQKKFGLERRSPPSSPSSDSGISRRQQYRNALGFPSSPSTTPRPKLHERNECFSEPSVHWRDFKARVNFISPDFDKRSSDREIIRMDQSGNTNSTSIQLGSLNQNVSISSLH 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03411 704 MobiDBLite consensus disorder prediction 483 497 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 330 354 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 79 100 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 442 641 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 64 100 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 214 242 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 64 78 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 442 474 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 268 292 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 337 354 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 603 635 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 207 292 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 375 395 - -
Aip04g03411 704 PANTHER LONGIFOLIA PROTEIN 3 699 - -
Aip04g03411 704 PANTHER LONGIFOLIA PROTEIN 3 699 IPR033334 GO:0051513
Aip04g03411 704 MobiDBLite consensus disorder prediction 165 186 - -
Aip04g03411 704 MobiDBLite consensus disorder prediction 531 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03411 Aip-Chr4 128688154 128691357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03411 3 613 TRM (TON1 Recruiting Motif) Superfamily AT3G02170 29.777 1.18e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03411 - - adu:107486612 1290.02