Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03405 ATGAAAACTCCACAAGTGTTCAAGGCATCACCATCTTCATTGGGACCACAAAACTTGTTACATTCATCTTCCACTTCTCTTCCTCTAACCTTTTTTGACATATTATGGCTAAGGTTGCCACCAGTTCAGCGAGTTTTCTTCTATGAATTCCCCCACCAACCCTCACTCTTCTATGATACCATTCTTCCCAAACTCAAACACTCTCTTTCTCTTGCACTTGCTTACTATTTTCCCCTTGCTGGAACCCTCACCTGGCCTCATGATTCCAACAAACCCATCATCACCTACAACGTTGGTGACACTCTCTCACTTATTGTAGCTGAATCTGATGCTGATTTCAACCATCTTTCAGGAACTGACCTTTGTGAAGCCTCAGAGGTTCACCATCTTGTTCCTGAATTGACCATTTCAGATGATCAAGCCACTGTCTTGGCCTTGCAAGTTACACTTTTTCCAAACCATGGATTCTCCATTGGAGTCACATCACACCATGCTGTTCTTGATGGAAAAACCTCAACATCCTTCATCAAATCTTGGGCTTATCTCTGCAACAAGCTAGGAGATTCATCATCATCACCTTGTGATTTGCCTCCTGAATTGAGTCCTTTCTTTGACAGAGAAATTGTGGGAGATCCCAAAGGAGTTGAAGCAAGATATCTGAGTGATTGGTTAAAGCAAGGTGGACCCAACAACAGAAGCCTCAAGGTTTGGAATCTTCAAGTTCCACAAGATTCAGTAAGGGGTTTGTTCAAATTGTCTAGATCAAACATTGAGAAGCTCAAGAACTTTGTAGCTTCAAGACAGAAAGGGAATAGCAATCTTCACTTGTCAAGTTTTGTTGTATCTCTTGCATATGCTTGGGTTTGCAAGATGAAAGCTGAAGAAACTAAGAGCAAGAAAGTTGGTATGGCTATAAATGTTGATTGCAGGAACCGATTAGATCCACCTCTTCCACCAACATACTTTGGAAACTGCATCGGTGCAAGAATTGCATTTGCTGAAACAAGAAAATTCTTGGATGAAGATGGTGGAGTAGTTGTGGCTGTGGAATCACTGAGTTCTGCTTTGGAGACACTGAAGGATGGGGTTCTGAATGAAGCTGAGACTTGGTCATCACTTTTGCTTGATGGGCTGCACAGTGATGAAGAAATGAAGCTTACTGGTGCTGCTGGCACACCAAGGTTTGAGGTTTATGGAAGTGATTTTGGATGGGGAAGACCAAAGAAAGTGGAAATGGTGTCTATTGACAGAACTGGTGCAATTTCTCTCTCAGATAGCAGAGATGGTGATGGTTTTGAGGTTGGTTTTGTGTCCAGTAAACCTTCAATGGAAGCATTTGCTTCCATCTTTGCCAAGGGTCTTCTTCTTTGA 1371 0.423 MKTPQVFKASPSSLGPQNLLHSSSTSLPLTFFDILWLRLPPVQRVFFYEFPHQPSLFYDTILPKLKHSLSLALAYYFPLAGTLTWPHDSNKPIITYNVGDTLSLIVAESDADFNHLSGTDLCEASEVHHLVPELTISDDQATVLALQVTLFPNHGFSIGVTSHHAVLDGKTSTSFIKSWAYLCNKLGDSSSSPCDLPPELSPFFDREIVGDPKGVEARYLSDWLKQGGPNNRSLKVWNLQVPQDSVRGLFKLSRSNIEKLKNFVASRQKGNSNLHLSSFVVSLAYAWVCKMKAEETKSKKVGMAINVDCRNRLDPPLPPTYFGNCIGARIAFAETRKFLDEDGGVVVAVESLSSALETLKDGVLNEAETWSSLLLDGLHSDEEMKLTGAAGTPRFEVYGSDFGWGRPKKVEMVSIDRTGAISLSDSRDGDGFEVGFVSSKPSMEAFASIFAKGLLL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03405 456 Pfam Transferase family 21 448 - -
Aip04g03405 456 Gene3D - 240 455 IPR023213 -
Aip04g03405 456 Gene3D - 5 233 IPR023213 -
Aip04g03405 456 SUPERFAMILY CoA-dependent acyltransferases 243 341 - -
Aip04g03405 456 PANTHER - 22 454 - -
Aip04g03405 456 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 22 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03405 Aip-Chr4 128651447 128653154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03405 45 407 Monolignol Biosynthesis Gene Families AT5G48930 28.158 8.87e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03405 - - ahf:112744586 741.11