Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03404 ATGAAAACTGTACAATTGTTCAAGGTATCTCCCTCTTCATTGGGATCACAAAATTCGTTACCTTCTTCAACTTCTCTTCCTCTAACCTTCTTTGACATACTATGGCTAAGGTTGCCACCAGTTCAGCGAGTTTTCTTCTATGAATTCCCTCACCAACCCTCACTCTTCTATGATACCATTCTTCCCAAACTCAAACACTCTCTTTCTCTTGCACTTGCTTACTATTTCCCTCTTGCTGGAATCCTCACCTGGCCTCATGATTCCAACAAACCCATCATCATCTACAACGTTGGTGACACTCTCTCACTTATTGTAGCTGAATCTGATGCTGATTTCAACCATCTTTCAGGATCTGACCTTTGTGAAGCCTCAGAGGTTCACCATCTTGTTCCTGAATTGTCCATTTCTGATGATCAAGCCACTGTCTTGGCCTTACAAGTTACCCTTTTTCCAAACCATGGCTTCTCCATTGGAATCACATCACACCATGCTGTTCTTGATGGAAAAACCTCAACATCCTTCATCAAATCTTGGGCTTATCTCTGCAACAAGCTAGGAGATTCATCATCATCACCTTGTGATTTGCCTCCTGAACTGAGTCCTTTCTTGGACAGAGAAATTGTGGAAGATCCCAAAGGAGTTGAAGCAAAATATCTGAGTGATTGGTTAAAGCAAGGTGGACCCAACAACAGAAGCCTCAAGGTTTGGAATCTTCAAGGTCCACAAGATTCAATAAGGGGTTTGTTCCATTTATCTAGATCAAACATTGAAAGCCTCAGAAAATTAGTGGTGTCAAAGAAGAAAGAGACTATGAATGATCTTCACCTGTCAAGTTTTGTGATATCTCTTGCATATGCTATTGTTTGCAAAGCTAAAGCTGAGAAGGTTAACACCAACAGAGTCTTTGTGGGTTTGAACGTTGATTGCAGATCAAGATTGGATCCTCCTCTTCCTCCAACTTACTTTGGAAACTGTATTGGTGCAAGATTAGCGGTTGCTGAAACAAAAGGATTGTTGGGTGAAGATGGAATAGTTGTTGCCGTTGAATCACTGAGTAATGCATTGGAGACTTTGAAGGATGGTGTGCTGAGTGGTGCAGAGAATTGGTCATCACTTTTGCATGATGGTTTGCATGATGATAAGTTTATGAGTGCTGCTGGGACACCAAAGTTTGAGGTTTATGGCAATGATTTTGGGTGGGGAAAGCCAAAGAAGGTGGAGATGGTGTCTATTGATAGAACTGGTGCATTTTGTTTCTCAGATAGCAGCAATGGTGATGGTGTTGAGATTGGTTTGGTGTCCAACAAAGAATCCATGGATACCTTTGCTTCTCTCTTTCTCCAAGGACTTGCATAA 1356 0.4159 MKTVQLFKVSPSSLGSQNSLPSSTSLPLTFFDILWLRLPPVQRVFFYEFPHQPSLFYDTILPKLKHSLSLALAYYFPLAGILTWPHDSNKPIIIYNVGDTLSLIVAESDADFNHLSGSDLCEASEVHHLVPELSISDDQATVLALQVTLFPNHGFSIGITSHHAVLDGKTSTSFIKSWAYLCNKLGDSSSSPCDLPPELSPFLDREIVEDPKGVEAKYLSDWLKQGGPNNRSLKVWNLQGPQDSIRGLFHLSRSNIESLRKLVVSKKKETMNDLHLSSFVISLAYAIVCKAKAEKVNTNRVFVGLNVDCRSRLDPPLPPTYFGNCIGARLAVAETKGLLGEDGIVVAVESLSNALETLKDGVLSGAENWSSLLHDGLHDDKFMSAAGTPKFEVYGNDFGWGKPKKVEMVSIDRTGAFCFSDSSNGDGVEIGLVSNKESMDTFASLFLQGLA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03404 451 PANTHER - 16 450 - -
Aip04g03404 451 Pfam Transferase family 23 444 - -
Aip04g03404 451 Gene3D - 1 228 IPR023213 -
Aip04g03404 451 SUPERFAMILY CoA-dependent acyltransferases 248 432 - -
Aip04g03404 451 Gene3D - 240 451 IPR023213 -
Aip04g03404 451 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 16 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03404 Aip-Chr4 128639756 128641139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03404 44 448 Monolignol Biosynthesis Gene Families AT5G48930 26.353 2.46e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03404 - - ahf:112744586 889.026