Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03403 ATGGCTTCTTCTGACAACAACATCTCCATCAAACTCCTTGACAAATGCACAGTTTCTCCACCGCCAGCACTATCAACTGATGTTACTGTTTCTCTGCCTCTCACTTTCTTTGACATGTTATGGGTTCGCTTCCACCCCGTTGAGCGTGTCTTCTTCTACAAACTTCACTCTCCTCCATCTTTCTTCTTCGAACATGTGCTTCCCAAGCTCAAAACCTCGCTCTCTCTTACCCTCCAACACTTCCTCCCTCTTGCTGGAAACCTACTTTGGCCTTCTCATTCAGATAAACCAATCCTTCAATACAATCCTGGTGATGGTGTTTCACTTCTCATAGCAGAATCCGATGCAGATTTCAACCATCTTTTGGGCTATAACTCACCGCGTGAAGCTTCTGAAACTCGATGCTTCGTACCAGAACTGGAAACACTGGAATCTCGTGCTGCTCTTATGTCTCTTCAGATCACTCTCTTCCCGAACAGTGGATTCAGCATCGGAATCAGCACCCACCATGCTTCTCTCGATGGGAAATCTTCCACCATGTTCATCAAAGCATGGGCTTCCATATGTCAAAGCCTTGAAGAAGAACAGAAAGAATCACCGATTTTGGTTCGCGAATTAGAGCCTTTCTTTGATAGAAAAGTTATCAAAGATGCAAAGGATGTTGGACCCTCGTTCTTGAACAATAGGTCGGACGTCATGTCCAAAATGTTCCCGGATGAGAACAACGTCAAGAAAAGCTTGAAGATTCTACCGTTCGAACCCAAGGTGAAGGACTCGGTTCGTGCAACGTTCAAGCTCACGCGTTCAGATTTGGAGAAGGTGAAGAAAAAGGTGTTGTCCAATTGGAACAGCAACGTTAATAATGGTGATGATGAAGAATCTACAAACACACCACCTAGTACTCTTTCTACTTTTGTTCTAACATGCAGCTATGTCTTGGTTTGTATCGCTAAGGCGATTAATGGCATTTTTAAGGAGAAACAAAAATTCGGGTTCGCTTTCACTGGTGATTGTAGGAAGAGGTTAGAGCCTCCAATACCTGAAAATTATTGCGGTAACTGTCTGTGGGCCAATTTTGTGGACGCAAAACCAGAGGACTTTGTTAAAGAAAACGGAGTGGTTCTTGTCGCTAAGGGAATTTACAAGAAGACAAAAATGTTGGGTATTGAAGGTTTTCGTGGTGTAGAATCATCAGCATTTGATAAGTACATGAATATGGCTAAAGAAGGAGTTGAAATGATTGGTATTGCTGGTTCTAATAGGTTTGGTGTTTATGGTATTGATTTTGGTTGGGGAAAACCTGAAAAAGTTGAGATAGCTTCAATTGATAGAGGTCTAACGATGGGTTTGGCTGAGAATAGTGATGGCAATGAAGGTGGGGTCGAGGTTGGTCTTGTTCTTAATAAGCAGGTGATGGATCTGTTTAGGACTTTGTTTCGTGAAGGACTTGAAGATGATTAA 1461 0.4264 MASSDNNISIKLLDKCTVSPPPALSTDVTVSLPLTFFDMLWVRFHPVERVFFYKLHSPPSFFFEHVLPKLKTSLSLTLQHFLPLAGNLLWPSHSDKPILQYNPGDGVSLLIAESDADFNHLLGYNSPREASETRCFVPELETLESRAALMSLQITLFPNSGFSIGISTHHASLDGKSSTMFIKAWASICQSLEEEQKESPILVRELEPFFDRKVIKDAKDVGPSFLNNRSDVMSKMFPDENNVKKSLKILPFEPKVKDSVRATFKLTRSDLEKVKKKVLSNWNSNVNNGDDEESTNTPPSTLSTFVLTCSYVLVCIAKAINGIFKEKQKFGFAFTGDCRKRLEPPIPENYCGNCLWANFVDAKPEDFVKENGVVLVAKGIYKKTKMLGIEGFRGVESSAFDKYMNMAKEGVEMIGIAGSNRFGVYGIDFGWGKPEKVEIASIDRGLTMGLAENSDGNEGGVEVGLVLNKQVMDLFRTLFREGLEDD 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03403 486 Gene3D - 6 236 IPR023213 -
Aip04g03403 486 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 486 - -
Aip04g03403 486 PANTHER - 9 486 - -
Aip04g03403 486 Pfam Transferase family 28 477 - -
Aip04g03403 486 Gene3D - 255 485 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03403 Aip-Chr4 128628422 128629882 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03403 8 481 Monolignol Biosynthesis Gene Families AT5G48930 24.900 1.46e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03403 - - aip:107635420 962.214