Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03397 ATGCAATACAAGGTGAAAAATATGGAGATGGTGACAATTCATGGTGACGATGATAGCAACCAAGAAAAAGAAAAGGAAGCATTTGCTCTCACAGCAGCATCAGAGCTGTTGATCAAAGGCACTGAAAACCCTTCTATATCTCCGGTGGTAGAGATGTTTCTCGATGATCCAACTCTTTCAAGTTCCATCCATCATCTAAACAAGTGGTTTTATGACGAAAATCGCCCTCTATACGAAATCACCTTGGGAAAACCTTTGTGGGAGTTTCTTGACAAGAACCCTACGAACTTGAGCTTGTTCAATGATGCTATGGCCAGTGATTCTCAGATGATAAAGTTGGCACTAAAGGATCATCACATGGCCTTTGAGGGGTTGGAAACAATTGTGGATGTTGGTGGTGGAACTGGAACCACGGCACAAATTTTCAGTGAGAAATTTCCAGAACTCAAATACATAGTATTTGATCTTCCACAGGTTGTGAAAATTTTGAAGGGATGCAACAATTTGAGCTTTGTTGGTGGAGACATGTTTGATTCCATTCCTAAGGATGATGCAATTCTACTTAAGGTAAGCATTTAA 579 0.4024 MQYKVKNMEMVTIHGDDDSNQEKEKEAFALTAASELLIKGTENPSISPVVEMFLDDPTLSSSIHHLNKWFYDENRPLYEITLGKPLWEFLDKNPTNLSLFNDAMASDSQMIKLALKDHHMAFEGLETIVDVGGGTGTTAQIFSEKFPELKYIVFDLPQVVKILKGCNNLSFVGGDMFDSIPKDDAILLKVSI 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03397 192 Pfam O-methyltransferase domain 64 189 IPR001077 GO:0008171
Aip04g03397 192 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 189 IPR029063 -
Aip04g03397 192 PANTHER O-METHYLTRANSFERASE 20 190 IPR016461 GO:0008168
Aip04g03397 192 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 192 IPR016461 GO:0008168
Aip04g03397 192 CDD AdoMet_MTases 127 188 - -
Aip04g03397 192 Gene3D Vaccinia Virus protein VP39 40 192 IPR029063 -
Aip04g03397 192 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 20 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03397 Aip-Chr4 128504612 128505527 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03397 28 189 Monolignol Biosynthesis Gene Families AT5G54160 33.951 3.47e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03397 K22588 - ahf:112740688 285.034