Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03375 ATGGCTTCAAACAACAATGGCCGCACGGCAAGTGAGAGCTTCAAAGCTCAAGCTCTTGTTTACAGGCACATGTATGGCATCCTAGACTCCATGTGTCTCAAGTGGATCGTTGACTTTCGCATACCAAACATAATCCACAACCATGGCAAACCCATTACTCTTTCAGAATTGGTTTCGGTTCTCAAAATTCCATCGGCTAAAGTTGATAGCACGGATCTTTTCATGCACTACATGGCACGTAATGGATTCTTTGATATAGTGACAATTCATGGTGACGATGATAGCAATCAAGAAAAAGAAAAGGAAGCATTTGCTCTCACAGCAGCATCAGAGCTGTTGATCAAAGGCACTGAAAACCCTTCTATATCTCCGGTGGTAGAGATGTTTCTCGGTGATCCAACTCTTTCAAGTTCCATGCATCATTTAAACAAGTGGTTTTATGACGAAAATCGCCCTCTATATGAAATCACCTTGGGAAAACCTTTGTGGGAGTTTCTTGATAAGAACCCTGCAAGCTTGAGCTTGTTCAATGATGCTATGGCCAGTGATTCTCAGATGATAAAGTTGGCACTAAAGGATCACAACATGATCTTTGAGGGATTGGAAACAATTGTGGATGTTGGTGGTGGAAATGGAACCACAGCTCAAATTATCAGTGAGAAATTTCCAGCACTCAAATGGATAGTATTTGATCTTCCAATGGTTGTGGAAGGTTTGAAGGGATGCAACAATTTGAGCTTTGTTGCTGGAGACATGTTTGAATCCATTCCTAAGGCTGATGCAATTCTACTTAAGGTAAGCATTTAA 807 0.4114 MASNNNGRTASESFKAQALVYRHMYGILDSMCLKWIVDFRIPNIIHNHGKPITLSELVSVLKIPSAKVDSTDLFMHYMARNGFFDIVTIHGDDDSNQEKEKEAFALTAASELLIKGTENPSISPVVEMFLGDPTLSSSMHHLNKWFYDENRPLYEITLGKPLWEFLDKNPASLSLFNDAMASDSQMIKLALKDHNMIFEGLETIVDVGGGNGTTAQIISEKFPALKWIVFDLPMVVEGLKGCNNLSFVAGDMFESIPKADAILLKVSI 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03375 268 SUPERFAMILY "Winged helix" DNA-binding domain 10 116 IPR036390 -
Aip04g03375 268 Gene3D - 1 113 IPR036388 -
Aip04g03375 268 PANTHER O-METHYLTRANSFERASE 2 266 IPR016461 GO:0008168
Aip04g03375 268 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 268 IPR016461 GO:0008168
Aip04g03375 268 Pfam O-methyltransferase domain 140 265 IPR001077 GO:0008171
Aip04g03375 268 Gene3D Vaccinia Virus protein VP39 117 268 IPR029063 -
Aip04g03375 268 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 265 IPR029063 -
Aip04g03375 268 Pfam Dimerisation domain 31 77 IPR012967 GO:0046983
Aip04g03375 268 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03375 Aip-Chr4 128142104 128143713 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03375 31 265 Monolignol Biosynthesis Gene Families AT5G54160 29.362 3.04e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03375 K22588 - ahf:112740688 409.838