Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03351 ATGGGGTTGAAATTTACAAAGCAGGGGCCACAAAAAGTTGATGACTTGAGTTTACAGAATCACATGATCAATTACCTTACCAAGAATTTTATTCGAAACTTGGTATCTAAGCAACGGAGACGGATGCTCATTGCCGGCTATGATCTTGACATGACATATATCACAGACAGAATATTGGCAATGTCATTTCCTGCGGAACGAATGCGAGCAGTGTATCGAAATCCTCTTTGGCAGGTGAAATCTGTGTTGGACATGACACACCATGAACATTATAAGATCTATAATCTCTGTATAGAAGAAAGTTATGATCCGGCAAACTTTCATGGACGGGTAGAAGCATACCCTTTTGATGATAACCATGTACCACCCCTTGAAATGATCAAAGATTTTTGTGAAAGTGTGCATTCATGGCTATCAAGTGATCCAAAAAATATTGCTGTCATTCATTGCATGGCAGGGAAGGGTAGAACTGGCTTAATGGTGTGTTCATACCTAACTTATTCTGGCATGACAGCAGATGAGGCTCTTCAATTGTATGCAGAGAGAAGGACAACAAATAATGAAGGAGTATCAATACCAAGCCAACGCCGTTATGTAAGGTACTTTGAAAGTGTACTTTCTACCCCTAGGGGCAGAGTGAGCTTGCCTCAACCATGTAGCAGAGAATTGCGCCGAATTCGCCTTTATGATACAGTTAACATCTGTGCAATATTCTTTGTGATTTCAGAGCTGCAGGAGGAGGCTCCTAACCAGTGCTATCGTCCGCCGGTGGAAATTTTCCGAGGGTGCTGCAGAGAGATTAAGAAAGGCTATCAGAGAACCAACAGTCCTCGCTACTATCTTTCTTATATTGAAGAAGAAAATGAAGATGGAACACAATCAGAACAAGAAGAACCTCGGATTGTTGTTCAAATGGACACAGAGAGTCCTGCAATATACAAGAAAACCTGTTTGGATTATTATTTCGACCAACCGATCCTATTAACTGGAGATGTACGTGTCATATTCTATGAGAAAATGATAGGAGGCCGTCTCTTCTATTGTTGTTTCAATACAGCTTTTGTTAAGAACAGCATGGTACAGCTGGGAATACAGGATTTGGACAAAGTTGGGAAGAAAGGAAGATCAATATGTGGAAGTGATTTTAGCTTGGAATTACTGTTTGGTCCTGCCAATTCATCAAGTGTATCCAATAGTGACAATGCTAGTATTGTTTCCTTGTGA 1224 0.406 MGLKFTKQGPQKVDDLSLQNHMINYLTKNFIRNLVSKQRRRMLIAGYDLDMTYITDRILAMSFPAERMRAVYRNPLWQVKSVLDMTHHEHYKIYNLCIEESYDPANFHGRVEAYPFDDNHVPPLEMIKDFCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVCSYLTYSGMTADEALQLYAERRTTNNEGVSIPSQRRYVRYFESVLSTPRGRVSLPQPCSRELRRIRLYDTVNICAIFFVISELQEEAPNQCYRPPVEIFRGCCREIKKGYQRTNSPRYYLSYIEEENEDGTQSEQEEPRIVVQMDTESPAIYKKTCLDYYFDQPILLTGDVRVIFYEKMIGGRLFYCCFNTAFVKNSMVQLGIQDLDKVGKKGRSICGSDFSLELLFGPANSSSVSNSDNASIVSL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03351 407 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 183 IPR000387 GO:0016311|GO:0016791
Aip04g03351 407 ProSiteProfiles C2 tensin-type domain profile. 235 391 IPR014020 -
Aip04g03351 407 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 395 - -
Aip04g03351 407 CDD PTP_PTEN 50 203 IPR045101 GO:0016791
Aip04g03351 407 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 279 390 IPR035892 -
Aip04g03351 407 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 46 207 IPR029021 -
Aip04g03351 407 Pfam C2 domain of PTEN tumour-suppressor protein 314 388 IPR014020 -
Aip04g03351 407 Gene3D Protein tyrosine phosphatase superfamily 26 209 IPR029021 -
Aip04g03351 407 ProSiteProfiles Phosphatase tensin-type domain profile. 40 209 IPR029023 -
Aip04g03351 407 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Aip04g03351 407 Gene3D - 267 393 - -
Aip04g03351 407 SMART PTEN_C2_2 216 390 IPR014020 -
Aip04g03351 407 Pfam Tyrosine phosphatase family 142 185 IPR026893 GO:0004721
Aip04g03351 407 PANTHER BNAC03G16750D PROTEIN 1 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03351 Aip-Chr4 127851895 127855431 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03351 1 393 Protein tyrosine phosphatase (PTP) family AT5G39400 65.915 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03351 K01110 - gmx:100809938 664.84